Variant report

Variant rs1371949
Chromosome Location chr8:53379622-53379623
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:53376400-53379800 Weak transcription Placenta Placenta
2 chr8:53378400-53379800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr8:53378400-53379800 Weak transcription Esophagus oesophagus
4 chr8:53379200-53379800 Enhancers HMEC breast
5 chr8:53379400-53379800 Flanking Active TSS HUES64 Cell Line embryonic stem cell
6 chr8:53379400-53379800 Active TSS HUVEC blood vessel
7 chr8:53379400-53380000 Flanking Active TSS Primary B cells from cord blood blood
8 chr8:53379400-53380000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
9 chr8:53379400-53380400 Active TSS Pancreatic Islets Pancreatic Islet
10 chr8:53379400-53380400 Active TSS A549 lung
11 chr8:53379400-53380400 Flanking Active TSS HepG2 liver
12 chr8:53379400-53380600 Active TSS iPS-20b Cell Line embryonic stem cell
13 chr8:53379400-53380600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr8:53379400-53380600 Active TSS Duodenum Mucosa Duodenum
15 chr8:53379600-53379800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr8:53379600-53379800 Bivalent/Poised TSS IMR90 fetal lung fibroblasts Cell Line lung
17 chr8:53379600-53379800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr8:53379600-53379800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr8:53379600-53379800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr8:53379600-53379800 Enhancers Primary T cells from cord blood blood
21 chr8:53379600-53379800 Flanking Active TSS Primary hematopoietic stem cells blood
22 chr8:53379600-53379800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
23 chr8:53379600-53379800 Bivalent Enhancer Muscle Satellite Cultured Cells --
24 chr8:53379600-53379800 Enhancers Cortex derived primary cultured neurospheres brain
25 chr8:53379600-53379800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
26 chr8:53379600-53379800 Bivalent Enhancer Liver Liver
27 chr8:53379600-53379800 Active TSS Brain Germinal Matrix brain
28 chr8:53379600-53379800 Flanking Active TSS Brain Hippocampus Middle brain
29 chr8:53379600-53379800 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
30 chr8:53379600-53379800 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
31 chr8:53379600-53380000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr8:53379600-53380000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr8:53379600-53380000 Enhancers Primary T helper cells fromperipheralblood blood
34 chr8:53379600-53380000 Enhancers Primary T killer memory cells from peripheral blood blood
35 chr8:53379600-53380000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr8:53379600-53380000 Flanking Active TSS Brain Cingulate Gyrus brain
37 chr8:53379600-53380000 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
38 chr8:53379600-53380000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
39 chr8:53379600-53380000 Flanking Active TSS NHEK skin
40 chr8:53379600-53380200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
41 chr8:53379600-53380200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
42 chr8:53379600-53380200 Enhancers Primary T killer naive cells fromperipheralblood blood
43 chr8:53379600-53380200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr8:53379600-53380200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
45 chr8:53379600-53380200 Active TSS Fetal Kidney kidney
46 chr8:53379600-53380200 Flanking Active TSS GM12878-XiMat blood
47 chr8:53379600-53380200 Active TSS Hela-S3 cervix
48 chr8:53379600-53380200 Active TSS Osteobl bone
49 chr8:53379600-53380400 Active TSS H1 Cell Line embryonic stem cell
50 chr8:53379600-53380400 Active TSS H9 Cell Line embryonic stem cell

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