Variant report
| Variant | rs1372468 |
|---|---|
| Chromosome Location | chr8:84938012-84938013 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:82)
| rs_ID | r2[population] |
|---|---|
| rs10113569 | 0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs11777433 | 1.00[ASN][1000 genomes] |
| rs11782758 | 1.00[ASN][1000 genomes] |
| rs11984648 | 1.00[ASN][1000 genomes] |
| rs11987598 | 1.00[ASN][1000 genomes] |
| rs11991853 | 1.00[ASN][1000 genomes] |
| rs11992457 | 1.00[ASN][1000 genomes] |
| rs11992556 | 1.00[ASN][1000 genomes] |
| rs13248069 | 1.00[ASN][1000 genomes] |
| rs13267324 | 1.00[ASN][1000 genomes] |
| rs13267861 | 1.00[ASN][1000 genomes] |
| rs13268001 | 1.00[ASN][1000 genomes] |
| rs13268144 | 1.00[ASN][1000 genomes] |
| rs13269519 | 1.00[ASN][1000 genomes] |
| rs13274795 | 1.00[ASN][1000 genomes] |
| rs13275936 | 1.00[ASN][1000 genomes] |
| rs13276374 | 1.00[ASN][1000 genomes] |
| rs13276529 | 1.00[ASN][1000 genomes] |
| rs13278138 | 1.00[ASN][1000 genomes] |
| rs13278524 | 1.00[ASN][1000 genomes] |
| rs13278818 | 1.00[ASN][1000 genomes] |
| rs13279831 | 1.00[ASN][1000 genomes] |
| rs13282075 | 1.00[ASN][1000 genomes] |
| rs1437506 | 1.00[ASN][1000 genomes] |
| rs1437507 | 1.00[ASN][1000 genomes] |
| rs1437508 | 1.00[ASN][1000 genomes] |
| rs1437516 | 1.00[ASN][1000 genomes] |
| rs1437517 | 1.00[ASN][1000 genomes] |
| rs1442050 | 0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs17700460 | 1.00[ASN][1000 genomes] |
| rs17778563 | 1.00[ASN][1000 genomes] |
| rs17778624 | 1.00[ASN][1000 genomes] |
| rs34067813 | 1.00[ASN][1000 genomes] |
| rs34256177 | 1.00[ASN][1000 genomes] |
| rs34633122 | 1.00[ASN][1000 genomes] |
| rs34756801 | 1.00[ASN][1000 genomes] |
| rs34811575 | 1.00[ASN][1000 genomes] |
| rs34881709 | 1.00[ASN][1000 genomes] |
| rs35106787 | 1.00[ASN][1000 genomes] |
| rs35162331 | 1.00[ASN][1000 genomes] |
| rs35175004 | 1.00[ASN][1000 genomes] |
| rs35218036 | 1.00[ASN][1000 genomes] |
| rs35586249 | 1.00[ASN][1000 genomes] |
| rs35634584 | 1.00[ASN][1000 genomes] |
| rs35714561 | 1.00[ASN][1000 genomes] |
| rs35910267 | 1.00[ASN][1000 genomes] |
| rs36036849 | 1.00[ASN][1000 genomes] |
| rs36171128 | 1.00[ASN][1000 genomes] |
| rs36174269 | 1.00[ASN][1000 genomes] |
| rs36180485 | 1.00[ASN][1000 genomes] |
| rs36183226 | 1.00[ASN][1000 genomes] |
| rs4478570 | 1.00[ASN][1000 genomes] |
| rs4612340 | 1.00[ASN][1000 genomes] |
| rs66725806 | 1.00[ASN][1000 genomes] |
| rs67284322 | 1.00[ASN][1000 genomes] |
| rs67963191 | 1.00[ASN][1000 genomes] |
| rs7014239 | 1.00[ASN][1000 genomes] |
| rs7017720 | 1.00[ASN][1000 genomes] |
| rs7018202 | 1.00[ASN][1000 genomes] |
| rs71522936 | 1.00[ASN][1000 genomes] |
| rs71522937 | 1.00[ASN][1000 genomes] |
| rs71522938 | 1.00[ASN][1000 genomes] |
| rs71522939 | 1.00[ASN][1000 genomes] |
| rs71522940 | 1.00[ASN][1000 genomes] |
| rs72694338 | 1.00[ASN][1000 genomes] |
| rs72694340 | 1.00[ASN][1000 genomes] |
| rs72694341 | 1.00[ASN][1000 genomes] |
| rs72694342 | 1.00[ASN][1000 genomes] |
| rs72694346 | 1.00[ASN][1000 genomes] |
| rs72694347 | 1.00[ASN][1000 genomes] |
| rs7462992 | 1.00[ASN][1000 genomes] |
| rs7832359 | 1.00[ASN][1000 genomes] |
| rs7842797 | 1.00[ASN][1000 genomes] |
| rs7842846 | 1.00[ASN][1000 genomes] |
| rs7844610 | 1.00[ASN][1000 genomes] |
| rs9692957 | 1.00[ASN][1000 genomes] |
| rs9692990 | 1.00[ASN][1000 genomes] |
| rs9692999 | 1.00[ASN][1000 genomes] |
| rs9693020 | 1.00[ASN][1000 genomes] |
| rs9694221 | 1.00[ASN][1000 genomes] |
| rs9694233 | 1.00[ASN][1000 genomes] |
| rs9694242 | 1.00[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv2753846 | chr8:84637092-85239703 | Active TSS Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr8:84937000-84938400 | Enhancers | Duodenum Mucosa | Duodenum |
| 2 | chr8:84937200-84938600 | Enhancers | Fetal Intestine Small | intestine |
| 3 | chr8:84937200-84939400 | Enhancers | Fetal Intestine Large | intestine |
| 4 | chr8:84937800-84938600 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 5 | chr8:84937800-84938800 | Enhancers | Small Intestine | intestine |
