Variant report

Variant rs1378794
Chromosome Location chr3:157217890-157217891
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:157213200-157221200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr3:157216600-157218000 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
3 chr3:157216600-157218000 Bivalent Enhancer Fetal Brain Male brain
4 chr3:157216600-157218400 Flanking Active TSS Hela-S3 cervix
5 chr3:157216600-157219800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr3:157216800-157218200 Active TSS ES-WA7 Cell Line embryonic stem cell
7 chr3:157217000-157218000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr3:157217000-157218000 Flanking Active TSS Primary hematopoietic stem cells blood
9 chr3:157217000-157218000 Flanking Active TSS Adipose Nuclei Adipose
10 chr3:157217000-157218000 Active TSS Fetal Brain Female brain
11 chr3:157217000-157218000 Flanking Active TSS HMEC breast
12 chr3:157217000-157218000 Active TSS NHLF lung
13 chr3:157217000-157218200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr3:157217000-157218200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr3:157217200-157218000 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr3:157217200-157218000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr3:157217200-157218000 Bivalent/Poised TSS A549 lung
18 chr3:157217200-157218000 Flanking Active TSS NH-A brain
19 chr3:157217200-157218200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
20 chr3:157217200-157218200 Flanking Active TSS Brain Germinal Matrix brain
21 chr3:157217200-157218200 Enhancers Placenta Amnion Placenta Amnion
22 chr3:157217200-157218200 Enhancers HSMMtube muscle
23 chr3:157217200-157219200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr3:157217200-157220000 Enhancers HUVEC blood vessel
25 chr3:157217400-157218000 Flanking Active TSS HUES6 Cell Line embryonic stem cell
26 chr3:157217400-157218000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr3:157217400-157218000 Flanking Bivalent TSS/Enh Fetal Lung lung
28 chr3:157217400-157218000 Enhancers HSMM muscle
29 chr3:157217400-157218200 Bivalent Enhancer Primary B cells from peripheral blood blood
30 chr3:157217400-157222200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr3:157217600-157218000 Flanking Active TSS HUES48 Cell Line embryonic stem cell
32 chr3:157217600-157218000 Flanking Active TSS HUES64 Cell Line embryonic stem cell
33 chr3:157217600-157218000 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
34 chr3:157217600-157218000 Enhancers Liver Liver
35 chr3:157217600-157218000 Bivalent/Poised TSS Fetal Muscle Trunk muscle
36 chr3:157217600-157218000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
37 chr3:157217600-157218000 Bivalent Enhancer Stomach Mucosa stomach
38 chr3:157217600-157218200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
39 chr3:157217600-157218200 Active TSS Colonic Mucosa Colon
40 chr3:157217600-157218200 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
41 chr3:157217600-157218200 Flanking Active TSS Fetal Kidney kidney
42 chr3:157217600-157218200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
43 chr3:157217600-157218200 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
44 chr3:157217600-157218400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr3:157217600-157218400 Enhancers Placenta Placenta
46 chr3:157217600-157218800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr3:157217600-157219400 Enhancers Cortex derived primary cultured neurospheres brain
48 chr3:157217800-157218000 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
49 chr3:157217800-157218000 Flanking Active TSS H1 Cell Line embryonic stem cell
50 chr3:157217800-157218000 Flanking Active TSS Breast Myoepithelial Primary Cells Breast

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