Variant report

Variant rs138826538
Chromosome Location chr3:53743911-53743912
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:53683200-53744200 Weak transcription Brain Inferior Temporal Lobe brain
2 chr3:53726600-53744000 Weak transcription Duodenum Mucosa Duodenum
3 chr3:53736800-53744000 Weak transcription Stomach Smooth Muscle stomach
4 chr3:53737400-53747800 Weak transcription Fetal Brain Male brain
5 chr3:53738800-53744000 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr3:53739800-53744400 Enhancers Fetal Heart heart
7 chr3:53740000-53744200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr3:53740200-53764400 Weak transcription Brain Cingulate Gyrus brain
9 chr3:53740400-53745400 Weak transcription Right Atrium heart
10 chr3:53740600-53744000 Weak transcription Fetal Thymus thymus
11 chr3:53740600-53744200 Weak transcription Brain Anterior Caudate brain
12 chr3:53741000-53744600 Enhancers Liver Liver
13 chr3:53741200-53751400 Weak transcription Fetal Brain Female brain
14 chr3:53741800-53744400 Enhancers Left Ventricle heart
15 chr3:53742600-53744000 Weak transcription Stomach Mucosa stomach
16 chr3:53742600-53744000 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr3:53742600-53744200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr3:53742600-53744200 Weak transcription HepG2 liver
19 chr3:53742600-53744800 Enhancers A549 lung
20 chr3:53742600-53778000 Weak transcription Pancreas Pancrea
21 chr3:53743000-53744000 Weak transcription Fetal Intestine Large intestine
22 chr3:53743000-53744400 Enhancers Right Ventricle heart
23 chr3:53743200-53744000 Weak transcription Fetal Intestine Small intestine
24 chr3:53743400-53744000 Enhancers Primary neutrophils fromperipheralblood blood
25 chr3:53743400-53744600 Genic enhancers Fetal Lung lung
26 chr3:53743600-53744000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr3:53743600-53744000 Weak transcription Spleen Spleen
28 chr3:53743600-53744200 Enhancers Pancreatic Islets Pancreatic Islet
29 chr3:53743800-53744200 Weak transcription Lung lung
30 chr3:53743800-53744400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr3:53743800-53744400 Enhancers Primary hematopoietic stem cells short term culture blood
32 chr3:53743800-53744600 Enhancers Skeletal Muscle Female skeletal muscle

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