Variant report

Variant rs1388970
Chromosome Location chr1:224253383-224253384
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224246400-224253400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:224249600-224255200 Weak transcription K562 blood
3 chr1:224249600-224256000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:224250600-224257800 Enhancers Rectal Mucosa Donor 31 rectum
5 chr1:224251000-224253800 Enhancers Fetal Intestine Large intestine
6 chr1:224251400-224253800 Enhancers Fetal Intestine Small intestine
7 chr1:224251400-224253800 Enhancers Stomach Mucosa stomach
8 chr1:224252000-224254400 Enhancers Rectal Mucosa Donor 29 rectum
9 chr1:224252000-224256200 Enhancers NHDF-Ad bronchial
10 chr1:224252000-224256600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:224252400-224253400 Enhancers Hela-S3 cervix
12 chr1:224252400-224253600 Enhancers Duodenum Mucosa Duodenum
13 chr1:224252400-224253800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:224252400-224256200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:224252600-224254200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:224252600-224255000 Weak transcription HSMM muscle
17 chr1:224252600-224255400 Weak transcription Small Intestine intestine
18 chr1:224252600-224256200 Enhancers Muscle Satellite Cultured Cells --
19 chr1:224252600-224258000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr1:224252800-224253400 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr1:224252800-224253600 Enhancers Osteobl bone
22 chr1:224252800-224253800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:224253000-224253600 Enhancers Primary T killer memory cells from peripheral blood blood
24 chr1:224253000-224253600 Enhancers NH-A brain
25 chr1:224253000-224253600 Enhancers NHEK skin
26 chr1:224253200-224253400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:224253200-224253400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:224253200-224253600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr1:224253200-224253600 Enhancers Primary T helper cells PMA-I stimulated --
30 chr1:224253200-224253600 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr1:224253200-224253600 Weak transcription Pancreas Pancrea
32 chr1:224253200-224253800 Enhancers Primary B cells from peripheral blood blood
33 chr1:224253200-224253800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:224253200-224253800 Enhancers HMEC breast
35 chr1:224253200-224256000 Enhancers HUVEC blood vessel

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