Variant report

Variant	rs139698386
Chromosome Location	chr9:102197522-102197523
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831667	chr9:102068047-102285691	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv527165	chr9:102194921-102214169	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv6636	chr9:102197504-102242604	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:102192200-102197600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr9:102193400-102197800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr9:102194200-102199800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr9:102195400-102202800	Enhancers	NHDF-Ad	bronchial
5	chr9:102195600-102197800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr9:102195600-102197800	Enhancers	NHLF	lung
7	chr9:102195800-102197600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr9:102196600-102199000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr9:102196600-102199200	Weak transcription	HSMMtube	muscle
10	chr9:102196600-102200400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr9:102196800-102200800	Weak transcription	Osteobl	bone
12	chr9:102197000-102198400	Weak transcription	HUES64 Cell Line	embryonic stem cell
13	chr9:102197000-102199200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr9:102197000-102200000	Weak transcription	NHEK	skin
15	chr9:102197000-102200200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr9:102197000-102200200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr9:102197000-102200200	Weak transcription	HMEC	breast
18	chr9:102197000-102200600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr9:102197000-102207600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links