Variant report

Variant	rs139705410
Chromosome Location	chr11:66862686-66862687
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531397	chr11:66653381-67465721	Active TSS Enhancers Strong transcription Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	271 gene(s)	inside rSNPs	diseases
2	nsv532287	chr11:66784014-67023899	Weak transcription Strong transcription Bivalent Enhancer Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
3	nsv365	chr11:66852591-66879246	Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv975118	chr11:66862674-66874347	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:66850800-66866000	Weak transcription	Right Atrium	heart
2	chr11:66861200-66866200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr11:66862200-66863000	Enhancers	A549	lung
4	chr11:66862400-66862800	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr11:66862400-66862800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
6	chr11:66862400-66862800	Enhancers	Hela-S3	cervix
7	chr11:66862400-66863000	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr11:66862400-66863000	Enhancers	Liver	Liver
9	chr11:66862400-66863000	Enhancers	K562	blood
10	chr11:66862400-66863200	Enhancers	H1 Cell Line	embryonic stem cell
11	chr11:66862600-66862800	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr11:66862600-66862800	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr11:66862600-66862800	Flanking Active TSS	HepG2	liver
14	chr11:66862600-66863000	Enhancers	iPS-15b Cell Line	embryonic stem cell
15	chr11:66862600-66863000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr11:66862600-66863000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
17	chr11:66862600-66863000	Enhancers	Duodenum Mucosa	Duodenum
18	chr11:66862600-66863200	Enhancers	Gastric	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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