Variant report

Variant	rs139849163
Chromosome Location	chr15:56364577-56364578
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761872	chr15:56211065-56426501	Flanking Active TSS Enhancers Weak transcription Strong transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
2	nsv833018	chr15:56325799-56492535	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	nsv1045906	chr15:56333180-56473614	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
4	esv3312198	chr15:56362260-56367158	Enhancers Weak transcription ZNF genes & repeats Active TSS	TF binding region lncRNA	1 gene(s)	inside rSNPs	n/a
5	nsv522888	chr15:56362968-56369124	Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	inside rSNPs	n/a
6	esv3414428	chr15:56363060-56366358	Weak transcription Active TSS Enhancers ZNF genes & repeats	TF binding region lncRNA	1 gene(s)	inside rSNPs	n/a
7	nsv977717	chr15:56363732-56365887	Weak transcription ZNF genes & repeats Active TSS Enhancers	lncRNA	n/a	inside rSNPs	n/a
8	esv3311796	chr15:56364371-56364867	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	n/a
9	esv3509844	chr15:56364394-56364865	Enhancers Active TSS Weak transcription	n/a	n/a	inside rSNPs	n/a
10	esv3509843	chr15:56364401-56364884	Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
11	esv3311793	chr15:56364429-56364839	Active TSS Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
12	esv3311795	chr15:56364431-56364832	Active TSS Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
13	esv3311794	chr15:56364481-56364762	Weak transcription	n/a	n/a	inside rSNPs	n/a
14	esv3311798	chr15:56364495-56364773	Weak transcription	n/a	n/a	inside rSNPs	n/a
15	esv3312199	chr15:56364495-56364773	Weak transcription	n/a	n/a	inside rSNPs	n/a
16	esv3509845	chr15:56364495-56364773	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:56363600-56383800	Weak transcription	HUES6 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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