Variant report

Variant rs1403045
Chromosome Location chr3:160396824-160396825
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:160393400-160397000 Enhancers HMEC breast
2 chr3:160393400-160397200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr3:160393400-160397400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr3:160394200-160397400 Enhancers ES-I3 Cell Line embryonic stem cell
5 chr3:160394400-160397400 Active TSS Stomach Mucosa stomach
6 chr3:160394600-160397400 Enhancers HUES64 Cell Line embryonic stem cell
7 chr3:160394800-160397800 Active TSS Rectal Mucosa Donor 29 rectum
8 chr3:160395000-160397200 Active TSS Duodenum Smooth Muscle Duodenum
9 chr3:160395000-160397400 Active TSS Colonic Mucosa Colon
10 chr3:160395000-160397600 Active TSS Rectal Mucosa Donor 31 rectum
11 chr3:160395000-160398000 Active TSS Duodenum Mucosa Duodenum
12 chr3:160395200-160397000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr3:160395200-160397000 Active TSS Pancreas Pancrea
14 chr3:160395200-160397400 Active TSS Rectal Smooth Muscle rectum
15 chr3:160395200-160397600 Enhancers iPS-20b Cell Line embryonic stem cell
16 chr3:160395200-160397800 Enhancers HUES48 Cell Line embryonic stem cell
17 chr3:160395400-160397000 Enhancers Fetal Muscle Leg muscle
18 chr3:160395600-160397200 Enhancers HUES6 Cell Line embryonic stem cell
19 chr3:160395600-160397400 Enhancers NHEK skin
20 chr3:160395600-160397800 Enhancers Hela-S3 cervix
21 chr3:160395600-160401600 Weak transcription Gastric stomach
22 chr3:160395600-160401800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr3:160395800-160400200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr3:160396200-160397000 Flanking Active TSS Fetal Stomach stomach
25 chr3:160396200-160397200 Enhancers Placenta Amnion Placenta Amnion
26 chr3:160396200-160397600 Enhancers A549 lung
27 chr3:160396600-160397000 Enhancers Esophagus oesophagus
28 chr3:160396600-160397000 Flanking Active TSS Fetal Intestine Large intestine
29 chr3:160396600-160397400 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr3:160396600-160397400 Flanking Active TSS Fetal Intestine Small intestine
31 chr3:160396600-160397400 Active TSS Sigmoid Colon Sigmoid Colon
32 chr3:160396800-160397000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr3:160396800-160397200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr3:160396800-160397200 Enhancers Fetal Kidney kidney
35 chr3:160396800-160397200 Active TSS Small Intestine intestine
36 chr3:160396800-160397200 Enhancers HepG2 liver

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