Variant report

Variant rs1404477
Chromosome Location chr7:83638574-83638575
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:83589000-83654600 Weak transcription Fetal Stomach stomach
2 chr7:83591200-83654600 Weak transcription Fetal Muscle Leg muscle
3 chr7:83606000-83654000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr7:83606200-83643200 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr7:83609800-83650400 Weak transcription NHLF lung
6 chr7:83610200-83642200 Weak transcription H9 Cell Line embryonic stem cell
7 chr7:83610200-83673000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr7:83622800-83643200 Weak transcription Fetal Muscle Trunk muscle
9 chr7:83624400-83651600 Weak transcription Fetal Intestine Small intestine
10 chr7:83625000-83646800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr7:83625600-83643600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr7:83626000-83650600 Weak transcription NH-A brain
13 chr7:83626400-83638600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr7:83626800-83638800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr7:83629400-83643600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr7:83632600-83642400 Strong transcription HUES64 Cell Line embryonic stem cell
17 chr7:83632800-83642200 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr7:83634800-83646200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr7:83634800-83652000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr7:83634800-83654600 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr7:83635000-83638800 Weak transcription Fetal Lung lung
22 chr7:83635000-83654400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr7:83635200-83640600 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr7:83635200-83651400 Weak transcription Stomach Smooth Muscle stomach
25 chr7:83635400-83650800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr7:83636200-83654800 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr7:83636800-83646800 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr7:83637000-83640000 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr7:83637800-83638800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr7:83638000-83639600 Enhancers Muscle Satellite Cultured Cells --
31 chr7:83638200-83638800 Weak transcription NHDF-Ad bronchial
32 chr7:83638200-83639400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr7:83638200-83639600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr7:83638400-83638600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr7:83638400-83638600 Enhancers Colon Smooth Muscle Colon
36 chr7:83638400-83638600 Flanking Active TSS A549 lung
37 chr7:83638400-83639000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr7:83638400-83639200 Enhancers Osteobl bone

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