Variant report

Variant	rs140503205
Chromosome Location	chr6:150262595-150262596
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:10)
CpG islands
(count:0)
Chromatin interactive
region (count:1)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:10 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr6:150262581-150263361	MCF-7	breast:	n/a	n/a
2	MXI1	chr6:150262484-150263566	SK-N-SH	brain:	n/a	n/a
3	MAX	chr6:150262573-150263523	A549	lung:	n/a	n/a
4	CTBP2	chr6:150262374-150263823	H1-hESC	embryonic stem cell:	n/a	n/a
5	POLR2A	chr6:150262589-150263536	U87	brain:	n/a	n/a
6	POLR2A	chr6:150262549-150263478	H1-neurons	neurons:	n/a	n/a
7	NR2F2	chr6:150262553-150263407	K562	blood:	n/a	n/a
8	POLR2A	chr6:150262583-150263536	U87	brain:	n/a	n/a
9	MAX	chr6:150262570-150263399	K562	blood:	n/a	n/a
10	JUN	chr6:150262526-150263619	K562	blood:	n/a	n/a

No data

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:150254783..150257862-chr6:150259479..150262603,4	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ULBP2-1	chr6:150261044-150262631	XLOC_005501
2	lnc-ULBP2-1	chr6:150261044-150262631	XLOC_005501
3	lnc-ULBP2-1	chr6:150261044-150262766	NONHSAT115525

No data

Variant related genes	Relation type
ULBP2	TF binding region
ENSG00000216621	Chromatin interaction

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886764	chr6:150114745-150393683	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
2	nsv517022	chr6:150145001-150426272	Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Strong transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
3	nsv886765	chr6:150198491-150288722	Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
4	esv1817805	chr6:150209592-150268708	Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Weak transcription ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
5	esv3332714	chr6:150259037-150275045	Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
6	nsv970174	chr6:150262064-150263659	Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:73 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150260200-150262600	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
2	chr6:150260400-150262600	Weak transcription	Right Atrium	heart
3	chr6:150260400-150262600	Weak transcription	HMEC	breast
4	chr6:150261400-150264000	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
5	chr6:150261600-150262600	Bivalent Enhancer	Primary B cells from peripheral blood	blood
6	chr6:150261800-150262600	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
7	chr6:150261800-150262600	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
8	chr6:150261800-150262600	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
9	chr6:150261800-150263200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr6:150262000-150262600	Bivalent/Poised TSS	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr6:150262200-150262600	Enhancers	Primary T helper cells PMA-I stimulated	--
12	chr6:150262200-150262600	Bivalent Enhancer	Fetal Thymus	thymus
13	chr6:150262200-150262800	Bivalent Enhancer	Primary hematopoietic stem cells	blood
14	chr6:150262200-150263200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
15	chr6:150262400-150262600	Flanking Bivalent TSS/Enh	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr6:150262400-150262600	Bivalent/Poised TSS	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr6:150262400-150262600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr6:150262400-150262600	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
19	chr6:150262400-150262600	Enhancers	Primary B cells from cord blood	blood
20	chr6:150262400-150262600	Active TSS	Primary T cells from cord blood	blood
21	chr6:150262400-150262600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
22	chr6:150262400-150262600	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
23	chr6:150262400-150262600	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
24	chr6:150262400-150262600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
25	chr6:150262400-150262600	Bivalent/Poised TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr6:150262400-150262600	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr6:150262400-150262600	Flanking Active TSS	Brain Anterior Caudate	brain
28	chr6:150262400-150262600	Flanking Bivalent TSS/Enh	Brain Germinal Matrix	brain
29	chr6:150262400-150262600	Flanking Bivalent TSS/Enh	Brain Inferior Temporal Lobe	brain
30	chr6:150262400-150262600	Bivalent Enhancer	Colonic Mucosa	Colon
31	chr6:150262400-150262600	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
32	chr6:150262400-150262600	Bivalent Enhancer	Fetal Intestine Large	intestine
33	chr6:150262400-150262600	Bivalent Enhancer	Fetal Intestine Small	intestine
34	chr6:150262400-150262600	Enhancers	Lung	lung
35	chr6:150262400-150262600	Enhancers	Pancreas	Pancrea
36	chr6:150262400-150262600	Flanking Bivalent TSS/Enh	Rectal Mucosa Donor 29	rectum
37	chr6:150262400-150262600	Bivalent Enhancer	Rectal Mucosa Donor 31	rectum
38	chr6:150262400-150262600	Bivalent/Poised TSS	Skeletal Muscle Male	skeletal muscle
39	chr6:150262400-150262600	Bivalent/Poised TSS	Skeletal Muscle Female	skeletal muscle
40	chr6:150262400-150262600	Flanking Bivalent TSS/Enh	Thymus	Thymus
41	chr6:150262400-150262600	Bivalent Enhancer	Dnd41	blood
42	chr6:150262400-150262600	Enhancers	Osteobl	bone
43	chr6:150262400-150262800	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
44	chr6:150262400-150262800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
45	chr6:150262400-150262800	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
46	chr6:150262400-150262800	Bivalent Enhancer	Fetal Brain Male	brain
47	chr6:150262400-150262800	Bivalent Enhancer	Sigmoid Colon	Sigmoid Colon
48	chr6:150262400-150262800	Bivalent Enhancer	Small Intestine	intestine
49	chr6:150262400-150262800	Enhancers	Spleen	Spleen
50	chr6:150262400-150263000	Flanking Bivalent TSS/Enh	Cortex derived primary cultured neurospheres	brain

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