| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1007097 |
chr1:151832796-152227977 |
Strong transcription Genic enhancers Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
196 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1012327 |
chr1:151835544-152200890 |
Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Active TSS Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
196 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv535159 |
chr1:151835544-152200890 |
Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
196 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv547853 |
chr1:152008671-152236760 |
Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
83 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1014095 |
chr1:152104486-152454591 |
Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
28 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv471347 |
chr1:152184558-152196669 |
ZNF genes & repeats Enhancers Active TSS Weak transcription
|
TF binding regionCpG islandlncRNAmiRNA target site
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
esv3351698 |
chr1:152184828-152192326 |
Active TSS Weak transcription ZNF genes & repeats
|
miRNA target site
|
n/a
|
inside rSNPs
|
diseases
|
| 8 |
esv3423709 |
chr1:152185028-152192026 |
ZNF genes & repeats Weak transcription Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 9 |
nsv8391 |
chr1:152185328-152194083 |
ZNF genes & repeats Active TSS Weak transcription
|
lncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
nsv824598 |
chr1:152185654-152193520 |
Weak transcription Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
nsv824609 |
chr1:152185665-152193520 |
Active TSS ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
nsv824620 |
chr1:152185672-152193520 |
Active TSS Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 13 |
esv1792227 |
chr1:152185731-152193368 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 14 |
esv1797676 |
chr1:152185731-152193368 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 15 |
esv1821751 |
chr1:152185731-152193368 |
ZNF genes & repeats Weak transcription Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 16 |
esv1828930 |
chr1:152185731-152193368 |
ZNF genes & repeats Weak transcription Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 17 |
esv1829215 |
chr1:152185731-152193368 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 18 |
esv19713 |
chr1:152185869-152196724 |
Enhancers Weak transcription ZNF genes & repeats Active TSS
|
TF binding regionCpG islandlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 19 |
esv1794879 |
chr1:152185890-152193168 |
Active TSS ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 20 |
esv1796906 |
chr1:152185890-152193168 |
Weak transcription Active TSS ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 21 |
esv1828100 |
chr1:152185890-152193168 |
ZNF genes & repeats Weak transcription Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 22 |
esv1830019 |
chr1:152185890-152193168 |
Active TSS ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 23 |
esv1800231 |
chr1:152185890-152196175 |
ZNF genes & repeats Active TSS Enhancers Weak transcription
|
lncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 24 |
esv20602 |
chr1:152185909-152193469 |
Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 25 |
esv3377292 |
chr1:152188428-152192926 |
ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 26 |
nsv824631 |
chr1:152191386-152193520 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:26 , 50 per page) page:
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