Variant report

Variant rs1408829
Chromosome Location chr1:178989064-178989065
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:178978600-178991000 Weak transcription Aorta Aorta
2 chr1:178978600-178991200 Weak transcription Psoas Muscle Psoas
3 chr1:178986400-178991000 Weak transcription Gastric stomach
4 chr1:178986400-178991200 Weak transcription Primary hematopoietic stem cells blood
5 chr1:178986400-178994200 Weak transcription Right Atrium heart
6 chr1:178986400-178994200 Weak transcription Spleen Spleen
7 chr1:178986400-178994400 Weak transcription Lung lung
8 chr1:178986600-178989400 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr1:178986600-178991000 Weak transcription Fetal Muscle Trunk muscle
10 chr1:178986600-178991200 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr1:178986600-178994000 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr1:178986800-178991000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr1:178986800-178991200 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr1:178986800-178994200 Weak transcription Liver Liver
15 chr1:178987000-178991000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr1:178987000-178991000 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr1:178987200-178989800 Enhancers Stomach Mucosa stomach
18 chr1:178987200-178990600 Weak transcription Primary monocytes fromperipheralblood blood
19 chr1:178987200-178990600 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr1:178987200-178991000 Weak transcription Colon Smooth Muscle Colon
21 chr1:178987200-178994200 Weak transcription Fetal Lung lung
22 chr1:178987400-178990400 Weak transcription Brain Angular Gyrus brain
23 chr1:178987400-178990400 Weak transcription A549 lung
24 chr1:178987400-178990400 Weak transcription NHLF lung
25 chr1:178987400-178990600 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr1:178987400-178990600 Weak transcription Brain Cingulate Gyrus brain
27 chr1:178987400-178990600 Weak transcription Brain Inferior Temporal Lobe brain
28 chr1:178987400-178990600 Weak transcription Fetal Heart heart
29 chr1:178987400-178990600 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr1:178987400-178990800 Weak transcription Muscle Satellite Cultured Cells --
31 chr1:178987400-178991000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:178987400-178991000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:178987400-178991000 Weak transcription Brain Anterior Caudate brain
34 chr1:178987400-178991000 Weak transcription Brain Hippocampus Middle brain
35 chr1:178987400-178991000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr1:178987400-178991000 Weak transcription Stomach Smooth Muscle stomach
37 chr1:178987400-178991000 Weak transcription HSMM muscle
38 chr1:178987400-178991000 Weak transcription HSMMtube muscle
39 chr1:178987400-178991000 Weak transcription Osteobl bone
40 chr1:178987400-178991200 Weak transcription Brain Substantia Nigra brain
41 chr1:178987400-178994000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:178987400-178994200 Weak transcription Left Ventricle heart
43 chr1:178987400-178994400 Weak transcription Fetal Stomach stomach
44 chr1:178987600-178989600 Enhancers Fetal Intestine Small intestine
45 chr1:178987600-178990400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr1:178987600-178990600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:178987600-178991000 Weak transcription Fetal Muscle Leg muscle
48 chr1:178987800-178989200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:178988000-178990600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr1:178988200-178989600 Enhancers Fetal Intestine Large intestine

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