Variant report

Variant	rs141451997
Chromosome Location	chr15:44798388-44798389
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr15:44792872..44795077-chr15:44796224..44800034,3	K562	blood:
2	chr15:44795686..44797676-chr15:44798253..44800267,2	K562	blood:
3	chr15:44798357..44800226-chr15:44837362..44838908,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431387	chr15:43929378-44862930	Weak transcription Strong transcription Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	158 gene(s)	inside rSNPs	diseases
2	nsv931051	chr15:43988761-44833518	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	154 gene(s)	inside rSNPs	diseases
3	esv3410956	chr15:44425145-44823647	Strong transcription Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
4	nsv904177	chr15:44582886-44821843	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
5	nsv904179	chr15:44614684-44821843	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
6	esv3386433	chr15:44654644-45037538	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	135 gene(s)	inside rSNPs	diseases
7	nsv904180	chr15:44783700-44820054	Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
8	nsv569301	chr15:44797575-44814968	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:44721000-44828000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr15:44740600-44824600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr15:44750000-44827400	Weak transcription	Pancreas	Pancrea
4	chr15:44750200-44828000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr15:44754600-44816200	Weak transcription	Brain Angular Gyrus	brain
6	chr15:44757000-44827400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
7	chr15:44774000-44800400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr15:44775800-44820200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr15:44776200-44801400	Strong transcription	Dnd41	blood
10	chr15:44777200-44803800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
11	chr15:44777600-44801800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr15:44778000-44827800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr15:44778000-44827800	Weak transcription	Psoas Muscle	Psoas
14	chr15:44779800-44813600	Weak transcription	H9 Cell Line	embryonic stem cell
15	chr15:44779800-44824200	Weak transcription	Gastric	stomach
16	chr15:44779800-44827800	Weak transcription	Aorta	Aorta
17	chr15:44783200-44819400	Weak transcription	Muscle Satellite Cultured Cells	--
18	chr15:44783200-44827800	Weak transcription	NHLF	lung
19	chr15:44783600-44828000	Weak transcription	HSMMtube	muscle
20	chr15:44783800-44816400	Weak transcription	HMEC	breast
21	chr15:44784000-44799800	Weak transcription	Osteobl	bone
22	chr15:44785800-44804800	Weak transcription	Fetal Heart	heart
23	chr15:44787200-44801000	Strong transcription	Primary monocytes fromperipheralblood	blood
24	chr15:44789400-44799800	Weak transcription	NHDF-Ad	bronchial
25	chr15:44790400-44827200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
26	chr15:44790800-44807000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
27	chr15:44790800-44813600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr15:44790800-44827800	Weak transcription	Small Intestine	intestine
29	chr15:44791000-44812000	Weak transcription	Colonic Mucosa	Colon
30	chr15:44791000-44818600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
31	chr15:44791400-44803000	Weak transcription	Fetal Brain Male	brain
32	chr15:44791800-44826800	Weak transcription	Brain Germinal Matrix	brain
33	chr15:44792800-44800000	Weak transcription	Skeletal Muscle Female	skeletal muscle
34	chr15:44794600-44800600	Strong transcription	HUES6 Cell Line	embryonic stem cell
35	chr15:44794600-44801000	Strong transcription	Primary T helper cells fromperipheralblood	blood
36	chr15:44794600-44801200	Strong transcription	HUES64 Cell Line	embryonic stem cell
37	chr15:44794600-44804200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr15:44795000-44820400	Strong transcription	Monocytes-CD14+_RO01746	blood
39	chr15:44795200-44801200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
40	chr15:44795200-44820200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
41	chr15:44795400-44799600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
42	chr15:44795400-44801600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr15:44795400-44802600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
44	chr15:44795400-44804600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
45	chr15:44795400-44809200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr15:44795600-44798800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
47	chr15:44795600-44798800	Strong transcription	Primary neutrophils fromperipheralblood	blood
48	chr15:44795600-44798800	Strong transcription	Spleen	Spleen
49	chr15:44795600-44801000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
50	chr15:44795600-44801600	Strong transcription	Fetal Intestine Large	intestine

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