Variant report

Variant	nsv904177
Chromosome Location	chr15:44582886-44821843
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2507)
CpG islands
(count:1100)
Chromatin interactive
region (count:109)
LncRNA
region (count:18)
Mature miRNA
region (count: 0)
miRNA target
sites (count:4)

(count:2507 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:44718966-44720044	HepG2	liver:	n/a	chr15:44719841-44719849
2	ARID3A	chr15:44720644-44720707	K562	blood:	n/a	n/a
3	ARID3A	chr15:44677230-44677411	K562	blood:	n/a	n/a
4	ARID3A	chr15:44718966-44719733	K562	blood:	n/a	n/a
5	ARID3A	chr15:44732846-44733620	K562	blood:	n/a	n/a
6	ARID3A	chr15:44588847-44589771	K562	blood:	n/a	n/a
7	ATF1	chr15:44719111-44720014	K562	blood:	n/a	n/a
8	ATF1	chr15:44781745-44782005	K562	blood:	n/a	n/a
9	ATF1	chr15:44588868-44589726	K562	blood:	n/a	n/a
10	ATF2	chr15:44600385-44601563	GM12878	blood:	n/a	n/a
11	ATF2	chr15:44611541-44611946	GM12878	blood:	n/a	n/a
12	ATF2	chr15:44603317-44603674	GM12878	blood:	n/a	n/a
13	ATF2	chr15:44600451-44601424	GM12878	blood:	n/a	n/a
14	ATF2	chr15:44677030-44677438	GM12878	blood:	n/a	n/a
15	ATF2	chr15:44719011-44719953	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr15:44601703-44602208	GM12878	blood:	n/a	n/a
17	ATF2	chr15:44719025-44720207	GM12878	blood:	n/a	n/a
18	ATF2	chr15:44718891-44720017	H1-hESC	embryonic stem cell:	n/a	n/a
19	ATF2	chr15:44677174-44677854	GM12878	blood:	n/a	n/a
20	ATF2	chr15:44719105-44720020	GM12878	blood:	n/a	n/a
21	ATF3	chr15:44589246-44589694	K562	blood:	n/a	n/a
22	BACH1	chr15:44718032-44718323	K562	blood:	n/a	n/a
23	BACH1	chr15:44589205-44589741	K562	blood:	n/a	n/a
24	BACH1	chr15:44600194-44600250	K562	blood:	n/a	n/a
25	BACH1	chr15:44753198-44753225	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr15:44719386-44719911	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr15:44677223-44677573	K562	blood:	n/a	n/a
28	BACH1	chr15:44677390-44677496	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr15:44589308-44589788	H1-hESC	embryonic stem cell:	n/a	n/a
30	BATF	chr15:44677285-44677584	GM12878	blood:	n/a	chr15:44677404-44677415
31	BATF	chr15:44601086-44601635	GM12878	blood:	n/a	n/a
32	BATF	chr15:44778621-44778919	GM12878	blood:	n/a	n/a
33	BATF	chr15:44589332-44589686	GM12878	blood:	n/a	chr15:44589502-44589513
34	BATF	chr15:44706233-44706588	GM12878	blood:	n/a	n/a
35	BATF	chr15:44600545-44600974	GM12878	blood:	n/a	n/a
36	BATF	chr15:44706288-44706574	GM12878	blood:	n/a	n/a
37	BATF	chr15:44600509-44601056	GM12878	blood:	n/a	n/a
38	BATF	chr15:44677259-44677509	GM12878	blood:	n/a	chr15:44677404-44677415
39	BATF	chr15:44601085-44601411	GM12878	blood:	n/a	n/a
40	BATF	chr15:44611620-44611972	GM12878	blood:	n/a	n/a
41	BCL11A	chr15:44600601-44601015	GM12878	blood:	n/a	n/a
42	BCL11A	chr15:44600611-44600896	GM12878	blood:	n/a	n/a
43	BCL11A	chr15:44677234-44677511	GM12878	blood:	n/a	n/a
44	BCL11A	chr15:44706292-44706510	GM12878	blood:	n/a	n/a
45	BCL11A	chr15:44601085-44601422	GM12878	blood:	n/a	n/a
46	BCL3	chr15:44719019-44719765	A549	lung:	n/a	n/a
47	BCL3	chr15:44821553-44822805	K562	blood:	n/a	n/a
48	BCL3	chr15:44600545-44600963	GM12878	blood:	n/a	n/a
49	BCL3	chr15:44600529-44601008	GM12878	blood:	n/a	n/a
50	BCL3	chr15:44719358-44719949	A549	lung:	n/a	n/a

(count:1100 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:44719012-44719062	K562	blood:	n/a
2	chr15:44588704-44588754	HEEpiC	esophagus:	n/a
3	chr15:44719012-44719062	K562	blood:	n/a
4	chr15:44588704-44588754	HEEpiC	esophagus:	n/a
5	chr15:44584673-44584723	AG09309	skin:	n/a
6	chr15:44719516-44719566	U87	brain:	n/a
7	chr15:44718852-44718902	AG04449	skin:	fetal
8	chr15:44719516-44719566	NHBE	bronchial:	n/a
9	chr15:44718396-44718446	MCF10A-Er-Src	breast:	n/a
10	chr15:44719510-44719560	NHDF-neo	bronchial:	n/a
11	chr15:44723502-44723552	AG09319	gingival:	n/a
12	chr15:44719516-44719566	CMK	blood:	n/a
13	chr15:44718396-44718446	HAEpiC	amniotic membrane:	n/a
14	chr15:44720131-44720181	HPAEpiC	pulmonary alveolar:	n/a
15	chr15:44719516-44719566	HMEC	breast:	n/a
16	chr15:44729878-44729928	SK-N-SH_RA	brain:	n/a
17	chr15:44719510-44719560	PANC-1	pancreas:	n/a
18	chr15:44719935-44719985	LNCaP	prostate:	n/a
19	chr15:44719665-44719715	HMEC	breast:	n/a
20	chr15:44588704-44588754	HUVEC	blood vessel:	n/a
21	chr15:44588704-44588754	AG09319	gingival:	n/a
22	chr15:44719012-44719062	BJ	skin:	n/a
23	chr15:44715351-44715401	H1-hESC	embryonic stem cell:	embryo
24	chr15:44729878-44729928	AG04450	lung:	fetal
25	chr15:44729878-44729928	GM12892	blood:	n/a
26	chr15:44732685-44732735	AG04449	skin:	fetal
27	chr15:44719665-44719715	HCF	heart:	n/a
28	chr15:44719935-44719985	HUVEC	blood vessel:	n/a
29	chr15:44715351-44715401	BE2_C	brain:	n/a
30	chr15:44719213-44719263	NH-A	brain:	n/a
31	chr15:44715351-44715401	HEK293	kidney:	embryo
32	chr15:44718852-44718902	BJ	skin:	n/a
33	chr15:44719030-44719080	MCF10A-Er-Src	breast:	n/a
34	chr15:44719665-44719715	AoSMC	blood vessel:	n/a
35	chr15:44584673-44584723	A549	lung:	n/a
36	chr15:44723502-44723552	AG09309	skin:	n/a
37	chr15:44729878-44729928	HepG2	liver:	n/a
38	chr15:44588704-44588754	AG10803	skin:	n/a
39	chr15:44617767-44617817	HUVEC	blood vessel:	n/a
40	chr15:44781962-44782012	HL-60	blood:	n/a
41	chr15:44719012-44719062	AoSMC	blood vessel:	n/a
42	chr15:44723502-44723552	SKMC	muscle:	n/a
43	chr15:44719012-44719062	SKMC	muscle:	n/a
44	chr15:44588704-44588754	HCT-116	colon:	n/a
45	chr15:44729878-44729928	PANC-1	pancreas:	n/a
46	chr15:44732685-44732735	HL-60	blood:	n/a
47	chr15:44729878-44729928	AoSMC	blood vessel:	n/a
48	chr15:44719516-44719566	HRPEpiC	eye:	n/a
49	chr15:44584673-44584723	U87	brain:	n/a
50	chr15:44715351-44715401	GM12891	blood:	n/a

(count:109 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr15:44719719..44720241-chr16:31470736..31471244,2	Hela-S3	cervix:
2	chr15:44752993..44755599-chr15:44759460..44761272,2	K562	blood:
3	chr15:44588053..44590579-chr15:44719354..44720991,3	K562	blood:
4	chr15:44598927..44601826-chr15:44602549..44604440,2	K562	blood:
5	chr15:44812885..44814662-chr15:44827033..44829093,2	K562	blood:
6	chr15:44755633..44758045-chr15:44829367..44831520,2	K562	blood:
7	chr14:103800177..103800718-chr15:44719817..44720485,2	Hela-S3	cervix:
8	chr15:44718905..44719745-chr15:91445892..91446538,2	Hela-S3	cervix:
9	chr15:44598749..44601264-chr15:44602549..44605810,3	K562	blood:
10	chr15:44793236..44795196-chr15:44828763..44831318,2	K562	blood:
11	chr15:44579788..44582534-chr15:44587472..44590995,5	K562	blood:
12	chr15:44588053..44590579-chr15:44719354..44720991,3	K562	blood:
13	chr15:44767423..44770241-chr15:44775945..44778021,2	MCF-7	breast:
14	chr15:44718864..44724435-chr15:44726722..44730869,8	K562	blood:
15	chr15:44707950..44709936-chr15:44718362..44720165,2	K562	blood:
16	chr15:44740779..44742949-chr15:44744572..44746524,2	K562	blood:
17	chr15:44738517..44741148-chr15:44741345..44743976,2	K562	blood:
18	chr15:44580463..44582588-chr15:44587860..44590321,2	MCF-7	breast:
19	chr15:44728934..44731532-chr15:44731569..44733789,3	K562	blood:
20	chr15:44587861..44590547-chr15:44741463..44744452,2	K562	blood:
21	chr15:44704582..44707025-chr15:44716948..44718913,2	K562	blood:
22	chr15:44752993..44755599-chr15:44759460..44761272,2	K562	blood:
23	chr15:44718711..44721721-chr15:44790246..44794155,3	K562	blood:
24	chr15:44589545..44591390-chr15:44828180..44830193,2	K562	blood:
25	chr15:44641156..44643504-chr15:44646406..44648886,2	K562	blood:
26	chr15:44795686..44797676-chr15:44798253..44800267,2	K562	blood:
27	chr15:44728691..44731050-chr15:44731813..44733565,2	K562	blood:
28	chr15:44770975..44773233-chr15:44779682..44782235,2	K562	blood:
29	chr15:44718927..44720457-chr15:44815051..44817603,2	K562	blood:
30	chr15:44704582..44707025-chr15:44716948..44718913,2	K562	blood:
31	chr15:44707778..44710924-chr15:44716587..44719642,3	K562	blood:
32	chr15:44809581..44812209-chr15:44829187..44830726,2	K562	blood:
33	chr1:11968301..11970323-chr15:44722385..44724773,2	K562	blood:
34	chr15:44673967..44676346-chr15:44716009..44718980,2	K562	blood:
35	chr15:44579706..44582433-chr15:44718054..44720169,2	MCF-7	breast:
36	chr15:44586214..44590579-chr15:44718275..44720991,4	K562	blood:
37	chr15:44682303..44684802-chr15:44709673..44711281,2	K562	blood:
38	chr15:44818388..44821592-chr15:44826607..44831713,7	MCF-7	breast:
39	chr15:44733894..44736774-chr15:44740235..44741858,2	K562	blood:
40	chr15:44583396..44585705-chr15:44587497..44589558,5	K562	blood:
41	chr15:44776722..44779562-chr15:44780236..44783124,2	K562	blood:
42	chr15:44812824..44815042-chr15:44827398..44829077,2	K562	blood:
43	chr15:44714578..44716892-chr15:44722864..44724371,2	K562	blood:
44	chr15:44719413..44722163-chr15:44807893..44809754,2	K562	blood:
45	chr15:44714578..44716892-chr15:44722864..44724371,2	K562	blood:
46	chr15:44583396..44585705-chr15:44587497..44589558,5	K562	blood:
47	chr15:44718440..44720700-chr15:44829136..44830677,2	K562	blood:
48	chr15:44587861..44590547-chr15:44741463..44744452,2	K562	blood:
49	chr15:44589031..44591213-chr15:44594276..44597075,2	K562	blood:
50	chr15:44718173..44721119-chr15:44770497..44772983,2	MCF-7	breast:

(count:18 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CTDSPL2-1	chr15:44715559-44715737	XLOC_011235
2	lnc-SPG11-2	chr15:44809449-44809681	ENSG00000259563.1
3	lnc-CTDSPL2-5	chr15:44673062-44673174	NONHSAT042149
4	lnc-CTDSPL2-3	chr15:44701717-44702045	NONHSAT042152
5	lnc-SPG11-3	chr15:44719307-44719342	ENSG00000259595.1
6	lnc-CASC4-1	chr15:44726452-44726705	NONHSAT042155
7	lnc-SPG11-4	chr15:44679518-44679686	ENSG00000259499.1
8	lnc-SPG11-4	chr15:44682164-44682649	ENSG00000259499.1
9	lnc-SPG11-1	chr15:44819455-44819737	ENSG00000179523.4
10	lnc-SPG11-2	chr15:44808848-44809112	ENSG00000259563.1
11	lnc-SPG11-3	chr15:44706408-44706559	ENSG00000259595.1
12	lnc-CTDSPL2-5	chr15:44674277-44674427	NONHSAT042149
13	lnc-SPG11-3	chr15:44705532-44705637	ENSG00000259595.1
14	lnc-CTDSPL2-1	chr15:44718492-44718499	XLOC_011235
15	lnc-SPG11-3	chr15:44697525-44697600	ENSG00000259595.1
16	lnc-SPG11-3	chr15:44694883-44695137	ENSG00000259595.1
17	lnc-CTDSPL2-3	chr15:44698528-44699081	NONHSAT042152
18	lnc-CTDSPL2-1	chr15:44717965-44718171	XLOC_011235

No data

(count:4 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	CTDSPL2	hsa-miR-132-3p	chr15:44817690-44817711
2	CTDSPL2	hsa-miR-193b-3p	chr15:44816792-44816813
3	CTDSPL2	hsa-miR-132-3p	chr15:44817704-44817710
4	CTDSPL2	hsa-miR-193b-3p	chr15:44816806-44816813

Variant related genes	Relation type
ENSG00000203572	TF binding region
CASC4	TF binding region
ENSG00000259499	TF binding region
ENSG00000259563	TF binding region
HNRNPMP1	TF binding region
ENSG00000196274	TF binding region
ENSG00000203575	TF binding region
ENSG00000250130	TF binding region
ENSG00000203574	TF binding region
ENSG00000259595	TF binding region
RN7SL347P	TF binding region
CTDSPL2	TF binding region
ENSG00000203573	TF binding region
ENSG00000203572	CpG island
CASC4	CpG island
ENSG00000259499	CpG island
ENSG00000259563	CpG island
HNRNPMP1	CpG island
ENSG00000196274	CpG island
ENSG00000203575	CpG island
ENSG00000250130	CpG island
ENSG00000203574	CpG island
ENSG00000259595	CpG island
RN7SL347P	CpG island
CTDSPL2	CpG island
ENSG00000203573	CpG island
ENSG00000175970	chromatin interactions
ENSG00000137770	chromatin interactions
ENSG00000259499	chromatin interactions
ENSG00000259335	chromatin interactions
ENSG00000196274	chromatin interactions
ENSG00000100664	chromatin interactions
ENSG00000250130	chromatin interactions
ENSG00000259595	chromatin interactions
ENSG00000104131	chromatin interactions
ENSG00000166734	chromatin interactions
ENSG00000079616	chromatin interactions
ENSG00000203572	chromatin interactions
ENSG00000179523	chromatin interactions
ENSG00000185963	chromatin interactions
ENSG00000203573	chromatin interactions
ENSG00000265191	chromatin interactions
ENSG00000180628	chromatin interactions
ENSG00000259563	chromatin interactions
ENSG00000197409	chromatin interactions
ENSG00000203575	chromatin interactions
ENSG00000260267	chromatin interactions
ENSG00000196547	chromatin interactions
ENSG00000103018	chromatin interactions
ENSG00000002919	chromatin interactions
ENSG00000196866	chromatin interactions
ENSG00000270103	chromatin interactions
ENSG00000197846	chromatin interactions
ENSG00000108654	chromatin interactions
ENSG00000201801	chromatin interactions
ENSG00000205542	chromatin interactions
ENSG00000203574	chromatin interactions

Extended variants
information (count: 8179 )
Associated
traits (count: 72 )

Variant overlapped rSNPs/rCNVs (count:8179 , 50 per page) page: 1 2 3 4 5 6 7 ... 164

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs8024461	chr15:44582886-44582887	Flanking Active TSS Active TSS Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	mRNA abundance
2	rs144362502	chr15:44582972-44582973	Flanking Active TSS Active TSS Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs77821389	chr15:44583041-44583042	Active TSS Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs562729662	chr15:44583047-44583048	Active TSS Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs531747243	chr15:44583061-44583062	Active TSS Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs113077748	chr15:44583088-44583089	Active TSS Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs150201657	chr15:44583093-44583094	Active TSS Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs145696665	chr15:44583158-44583159	Active TSS Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs1185436	chr15:44583181-44583182	Active TSS Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs148920650	chr15:44583201-44583202	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs573328416	chr15:44583242-44583243	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs570682638	chr15:44583247-44583248	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs539742080	chr15:44583248-44583249	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs369215703	chr15:44583266-44583267	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs577138423	chr15:44583303-44583304	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs59553911	chr15:44583331-44583332	Active TSS Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs576313608	chr15:44583445-44583446	Active TSS Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs535600285	chr15:44583518-44583519	Active TSS Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs554788297	chr15:44583537-44583538	Active TSS Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs574844133	chr15:44583547-44583548	Active TSS Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs540304845	chr15:44583548-44583549	Active TSS Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs191028261	chr15:44583606-44583607	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs182816742	chr15:44583738-44583739	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs143008312	chr15:44583798-44583799	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs187282124	chr15:44583941-44583942	Weak transcription Active TSS Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs201483786	chr15:44584041-44584042	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs531807831	chr15:44584049-44584050	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs372106530	chr15:44584073-44584074	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs145104588	chr15:44584080-44584081	Weak transcription Enhancers Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs372892540	chr15:44584142-44584143	Weak transcription Enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs148229281	chr15:44584268-44584269	Weak transcription Enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs34217674	chr15:44584399-44584400	Weak transcription Enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs527353736	chr15:44584400-44584401	Weak transcription Enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs200049402	chr15:44584418-44584419	Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs141192551	chr15:44584426-44584427	Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs190572707	chr15:44584427-44584428	Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs547124864	chr15:44584504-44584505	Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs570418128	chr15:44584508-44584509	Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs532916285	chr15:44584518-44584519	Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs150737879	chr15:44584522-44584523	Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs182816171	chr15:44584539-44584540	Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs112848627	chr15:44584561-44584562	Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs535663934	chr15:44584578-44584579	Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs188441636	chr15:44584582-44584583	Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs139047717	chr15:44584586-44584587	Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs534299574	chr15:44584596-44584597	Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs201983546	chr15:44584659-44584660	Weak transcription Strong transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs553931740	chr15:44584672-44584673	Weak transcription Strong transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs371921337	chr15:44584759-44584760	Weak transcription Strong transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs541323766	chr15:44584775-44584776	Weak transcription Strong transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:72)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	17053054	CNVD
Cancer	21129771	CNVD
Papillary thyroid carcinoma	22161024	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	21045282	CNVD
Breast cancer	22032731	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Mental retardation	17124404	CNVD
Melanoma	17363583	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Cancer	20164919	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
early-passage human iPS cells	21368824	CNVD
Acute myeloid leukemia	19651601	CNVD
Marfan syndrome	17492313	CNVD
Esophageal adenocarcinoma	18820669	CNVD

Chromatin state (count:4937 , 50 per page) page: 1 2 3 4 5 6 7 ... 99

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:44579400-44583000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr15:44579400-44583000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
3	chr15:44579400-44583000	Active TSS	Fetal Adrenal Gland	Adrenal Gland
4	chr15:44579400-44583600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr15:44579400-44584000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr15:44579600-44583400	Active TSS	K562	blood
7	chr15:44579600-44585000	Active TSS	GM12878-XiMat	blood
8	chr15:44579800-44583000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
9	chr15:44579800-44583000	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr15:44579800-44583600	Active TSS	NHLF	lung
11	chr15:44581200-44583000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
12	chr15:44581200-44583000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr15:44581600-44583000	Flanking Active TSS	Brain Anterior Caudate	brain
14	chr15:44581600-44583000	Flanking Active TSS	Dnd41	blood
15	chr15:44581600-44583000	Flanking Active TSS	Hela-S3	cervix
16	chr15:44581800-44583000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
17	chr15:44581800-44583000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr15:44581800-44583200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr15:44581800-44583600	Enhancers	Sigmoid Colon	Sigmoid Colon
20	chr15:44582000-44583000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr15:44582000-44583000	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr15:44582000-44583000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
23	chr15:44582000-44583000	Enhancers	Primary monocytes fromperipheralblood	blood
24	chr15:44582000-44583000	Enhancers	Primary T helper naive cells from peripheral blood	blood
25	chr15:44582000-44583000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
26	chr15:44582000-44583000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
27	chr15:44582000-44583000	Active TSS	Fetal Muscle Leg	muscle
28	chr15:44582000-44583000	Weak transcription	Pancreas	Pancrea
29	chr15:44582000-44583000	Flanking Active TSS	Osteobl	bone
30	chr15:44582000-44583200	Enhancers	Primary T cells fromperipheralblood	blood
31	chr15:44582000-44583600	Enhancers	Primary neutrophils fromperipheralblood	blood
32	chr15:44582000-44583600	Enhancers	Primary B cells from peripheral blood	blood
33	chr15:44582000-44583800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
34	chr15:44582000-44584000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
35	chr15:44582000-44584000	Enhancers	Liver	Liver
36	chr15:44582000-44584000	Enhancers	Colon Smooth Muscle	Colon
37	chr15:44582000-44584800	Weak transcription	Fetal Muscle Trunk	muscle
38	chr15:44582000-44588800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr15:44582000-44589000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
40	chr15:44582000-44591200	Weak transcription	Spleen	Spleen
41	chr15:44582000-44592000	Weak transcription	Esophagus	oesophagus
42	chr15:44582000-44602000	Weak transcription	Gastric	stomach
43	chr15:44582000-44639400	Weak transcription	Lung	lung
44	chr15:44582200-44583000	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
45	chr15:44582200-44583000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
46	chr15:44582200-44583000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr15:44582200-44583000	Enhancers	Adipose Nuclei	Adipose
48	chr15:44582200-44583000	Enhancers	Fetal Intestine Large	intestine
49	chr15:44582200-44583000	Enhancers	Fetal Lung	lung
50	chr15:44582200-44583000	Enhancers	Fetal Stomach	stomach

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