Variant report

Variant	rs1416001
Chromosome Location	chr1:219862262-219862263
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12035801	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17006547	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17606522	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs57963244	0.97[ASN][1000 genomes]
rs59220450	0.97[ASN][1000 genomes]
rs61677257	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs61836296	0.97[ASN][1000 genomes]
rs6541235	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs74139366	0.97[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:219859400-219863000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr1:219861600-219862600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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