Variant report

Variant	rs141602771
Chromosome Location	chr21:15855546-15855547
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:15848084..15850910-chr21:15854606..15856566,4	K562	blood:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1063703	chr21:15777995-15882121	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv544375	chr21:15777995-15882121	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1059591	chr21:15835325-15969195	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv1056423	chr21:15838309-15948474	Enhancers Flanking Active TSS Active TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	nsv544376	chr21:15855470-15948474	Weak transcription Active TSS Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:15847800-15874800	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr21:15851600-15856400	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr21:15851800-15855800	Enhancers	K562	blood
4	chr21:15852400-15860400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr21:15852600-15855600	Enhancers	Primary hematopoietic stem cells	blood
6	chr21:15853200-15885800	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr21:15853400-15905400	Weak transcription	HUVEC	blood vessel
8	chr21:15853600-15855800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
9	chr21:15854000-15855600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
10	chr21:15854000-15855800	Enhancers	Dnd41	blood
11	chr21:15854200-15855800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
12	chr21:15854200-15857400	ZNF genes & repeats	GM12878-XiMat	blood
13	chr21:15854600-15855600	Enhancers	Primary T helper cells PMA-I stimulated	--
14	chr21:15854600-15855600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr21:15854600-15855800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
16	chr21:15854600-15857000	Enhancers	Primary neutrophils fromperipheralblood	blood
17	chr21:15854600-15867600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
18	chr21:15854600-15868600	Weak transcription	Fetal Thymus	thymus
19	chr21:15854800-15855600	Enhancers	Primary T cells from cord blood	blood
20	chr21:15854800-15855600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr21:15854800-15860400	Weak transcription	Primary T cells fromperipheralblood	blood
22	chr21:15854800-15864800	Weak transcription	Primary B cells from peripheral blood	blood
23	chr21:15854800-15867600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
24	chr21:15854800-15875600	Weak transcription	Thymus	Thymus
25	chr21:15855000-15855800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
26	chr21:15855000-15856200	Enhancers	Primary hematopoietic stem cells short term culture	blood
27	chr21:15855200-15860600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
28	chr21:15855200-15867000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
29	chr21:15855400-15856000	Weak transcription	Primary B cells from cord blood	blood
30	chr21:15855400-15856200	Enhancers	Spleen	Spleen
31	chr21:15855400-15867200	Weak transcription	Primary T helper cells fromperipheralblood	blood
32	chr21:15855400-15869000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
33	chr21:15855400-15871000	Weak transcription	Primary T helper naive cells from peripheral blood	blood

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