Variant report

Variant	rs143503106
Chromosome Location	chr12:10954403-10954404
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049362	chr12:10893573-11018850	Bivalent Enhancer Weak transcription ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv898776	chr12:10909412-11032045	Genic enhancers Strong transcription ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	nsv976762	chr12:10952631-10955306	Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:10953800-10955200	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr12:10953800-10955200	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr12:10954200-10954600	Enhancers	iPS-20b Cell Line	embryonic stem cell
4	chr12:10954200-10955800	Enhancers	ES-I3 Cell Line	embryonic stem cell
5	chr12:10954200-10955800	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr12:10954400-10954600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr12:10954400-10955200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr12:10954400-10955200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr12:10954400-10955600	Enhancers	H1 Cell Line	embryonic stem cell
10	chr12:10954400-10955600	Enhancers	H9 Cell Line	embryonic stem cell
11	chr12:10954400-10955600	Enhancers	HUES6 Cell Line	embryonic stem cell
12	chr12:10954400-10955600	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr12:10954400-10955600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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