Variant report

Variant	rs1436608
Chromosome Location	chr8:35650668-35650669
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs3802318	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533420	chr8:35358115-36227536	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv1032540	chr8:35565491-35949132	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:35630200-35653400	Weak transcription	Duodenum Mucosa	Duodenum
2	chr8:35633000-35650800	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr8:35638000-35651600	Weak transcription	Fetal Brain Female	brain
4	chr8:35641000-35653200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr8:35641000-35656000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr8:35649000-35653400	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr8:35649000-35655600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr8:35649200-35652600	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr8:35649200-35654000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
10	chr8:35649400-35651000	Weak transcription	HUES48 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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