Variant report

Variant	rs143792273
Chromosome Location	chr8:86560035-86560036
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:40)
CpG islands
(count:0)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:40 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RXRA	chr8:86559828-86560196	HepG2	liver:	n/a	n/a
2	FOSL2	chr8:86559869-86560238	HepG2	liver:	n/a	n/a
3	ZBTB33	chr8:86559893-86560159	GM12878	blood:	n/a	n/a
4	ZBTB33	chr8:86559899-86560172	K562	blood:	n/a	n/a
5	ZBTB33	chr8:86559855-86560256	GM12878	blood:	n/a	n/a
6	SIN3AK20	chr8:86559882-86560153	HepG2	liver:	n/a	n/a
7	USF1	chr8:86559905-86560070	HepG2	liver:	n/a	n/a
8	ZBTB33	chr8:86559867-86560251	HepG2	liver:	n/a	n/a
9	FOXA1	chr8:86559851-86560267	HepG2	liver:	n/a	n/a
10	SPI1	chr8:86559978-86560164	K562	blood:	n/a	n/a
11	TCF3	chr8:86559968-86560154	GM12878	blood:	n/a	n/a
12	GATA2	chr8:86559873-86560385	K562	blood:	n/a	n/a
13	EP300	chr8:86559991-86560170	GM12878	blood:	n/a	n/a
14	EP300	chr8:86559866-86560171	GM12878	blood:	n/a	chr8:86559872-86559886
15	HEY1	chr8:86559945-86560166	K562	blood:	n/a	n/a
16	SP1	chr8:86559837-86560256	HepG2	liver:	n/a	n/a
17	ZBTB33	chr8:86559838-86560248	K562	blood:	n/a	n/a
18	PBX3	chr8:86559907-86560183	GM12878	blood:	n/a	n/a
19	SP1	chr8:86559855-86560242	GM12878	blood:	n/a	n/a
20	ZBTB33	chr8:86559958-86560114	HepG2	liver:	n/a	n/a
21	GABPA	chr8:86559930-86560160	Hela-S3	cervix:	n/a	n/a
22	POU2F2	chr8:86559943-86560215	GM12878	blood:	n/a	n/a
23	SIX5	chr8:86559877-86560159	K562	blood:	n/a	n/a
24	TCF12	chr8:86559882-86560158	GM12878	blood:	n/a	n/a
25	POU2F2	chr8:86559848-86560244	GM12878	blood:	n/a	n/a
26	SP1	chr8:86559878-86560224	GM12878	blood:	n/a	n/a
27	RXRA	chr8:86559981-86560164	HepG2	liver:	n/a	n/a
28	EBF1	chr8:86559907-86560154	GM12878	blood:	n/a	n/a
29	TCF12	chr8:86559912-86560160	HepG2	liver:	n/a	n/a
30	BCL11A	chr8:86559954-86560254	GM12878	blood:	n/a	n/a
31	PAX5	chr8:86559892-86560235	GM12878	blood:	n/a	n/a
32	JUND	chr8:86559912-86560227	HepG2	liver:	n/a	n/a
33	SIX5	chr8:86559866-86560215	K562	blood:	n/a	n/a
34	FOSL2	chr8:86559841-86560266	HepG2	liver:	n/a	n/a
35	PAX5	chr8:86559968-86560171	GM12878	blood:	n/a	n/a
36	PAX5	chr8:86559827-86560268	GM12878	blood:	n/a	n/a
37	USF1	chr8:86559931-86560195	HepG2	liver:	n/a	n/a
38	IRF4	chr8:86559870-86560276	GM12878	blood:	n/a	n/a
39	BCL11A	chr8:86559910-86560168	GM12878	blood:	n/a	n/a
40	SIX5	chr8:86559890-86560242	GM12878	blood:	n/a	n/a

No data

Variant related genes	Relation type
REXO1L8P	TF binding region

Extended variants
information (count: 56 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:56 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1804888	chr8:86263098-86986703	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
2	esv1807380	chr8:86405478-86886412	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
3	esv1829254	chr8:86405478-86886412	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
4	esv1831796	chr8:86405478-86886412	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
5	esv1807498	chr8:86405478-86986703	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
6	esv1828364	chr8:86405478-86986703	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
7	esv1831268	chr8:86405478-86986703	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
8	esv1844000	chr8:86405478-86986703	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
9	esv1851686	chr8:86405478-86986703	ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
10	nsv427824	chr8:86405478-86986703	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
11	esv2758162	chr8:86405478-87055053	Enhancers Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
12	esv2759624	chr8:86405478-87055053	Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
13	nsv428204	chr8:86405478-87312208	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
14	nsv831378	chr8:86433343-86569655	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
15	nsv891123	chr8:86434228-86572238	Enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
16	nsv891125	chr8:86453838-86778025	Weak transcription ZNF genes & repeats Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
17	nsv529563	chr8:86467090-87381984	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
18	nsv891128	chr8:86470188-86560123	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
19	nsv891130	chr8:86490859-86572238	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
20	nsv1030668	chr8:86491767-86785757	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
21	nsv891131	chr8:86501203-86560123	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
22	nsv891133	chr8:86505353-86770710	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
23	nsv1018855	chr8:86505353-86785757	Enhancers Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
24	nsv1032292	chr8:86511775-86785757	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
25	nsv1028757	chr8:86515849-86785757	Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
26	nsv1031512	chr8:86515849-86847889	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	12 gene(s)	inside rSNPs	diseases
27	nsv891134	chr8:86518484-86809706	Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
28	nsv8362	chr8:86538750-86842279	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
29	esv1821088	chr8:86550638-86831750	ZNF genes & repeats Weak transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island	7 gene(s)	inside rSNPs	diseases
30	esv1813849	chr8:86551959-86840811	ZNF genes & repeats Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island	7 gene(s)	inside rSNPs	diseases
31	esv1825508	chr8:86551959-86840811	Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island	7 gene(s)	inside rSNPs	diseases
32	esv1806242	chr8:86552159-86840382	ZNF genes & repeats Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island	7 gene(s)	inside rSNPs	diseases
33	esv1827662	chr8:86552159-86840382	ZNF genes & repeats Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Enhancers	TF binding region CpG island	7 gene(s)	inside rSNPs	diseases
34	esv1827990	chr8:86552159-86840382	ZNF genes & repeats Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS	TF binding region CpG island	7 gene(s)	inside rSNPs	diseases
35	esv1849776	chr8:86552159-86840382	ZNF genes & repeats Weak transcription Bivalent/Poised TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island	7 gene(s)	inside rSNPs	diseases
36	esv13411	chr8:86552335-86576414	Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Enhancers	TF binding region CpG island	3 gene(s)	inside rSNPs	diseases
37	nsv471542	chr8:86552570-86574324	ZNF genes & repeats Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Active TSS	TF binding region CpG island	2 gene(s)	inside rSNPs	diseases
38	esv1814282	chr8:86553525-86840811	Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers	TF binding region CpG island	7 gene(s)	inside rSNPs	diseases
39	esv1815039	chr8:86553725-86840382	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island	7 gene(s)	inside rSNPs	diseases
40	esv3386586	chr8:86553800-86576451	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer	TF binding region CpG island	3 gene(s)	inside rSNPs	diseases
41	esv3386620	chr8:86553800-86576451	Weak transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Active TSS	TF binding region CpG island	3 gene(s)	inside rSNPs	diseases
42	esv3411663	chr8:86553800-86576451	ZNF genes & repeats Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS	TF binding region CpG island	3 gene(s)	inside rSNPs	diseases
43	esv3426842	chr8:86553800-86576451	ZNF genes & repeats Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS	TF binding region CpG island	3 gene(s)	inside rSNPs	diseases
44	esv3446446	chr8:86553800-86576451	ZNF genes & repeats Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island	3 gene(s)	inside rSNPs	diseases
45	esv3451518	chr8:86553800-86576451	Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island	3 gene(s)	inside rSNPs	diseases
46	nsv891135	chr8:86553992-86839183	Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers	TF binding region CpG island	7 gene(s)	inside rSNPs	diseases
47	nsv891136	chr8:86553992-86841229	Weak transcription ZNF genes & repeats Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS	TF binding region CpG island	8 gene(s)	inside rSNPs	diseases
48	esv1843763	chr8:86554284-86840811	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Enhancers	TF binding region CpG island	7 gene(s)	inside rSNPs	diseases
49	esv1848299	chr8:86554484-86840382	ZNF genes & repeats Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers	TF binding region CpG island	7 gene(s)	inside rSNPs	diseases
50	nsv820734	chr8:86554663-86576414	ZNF genes & repeats Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer	TF binding region CpG island	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

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