Variant report

Variant	rs1441990
Chromosome Location	chr8:130006472-130006473
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs10091534	0.87[EUR][1000 genomes]
rs10092630	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10095301	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10099762	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10102305	0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10103413	0.83[EUR][1000 genomes]
rs10108864	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10109509	0.87[EUR][1000 genomes]
rs10110358	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10110974	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10464829	0.85[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.89[GIH][hapmap];0.95[JPT][hapmap];0.87[ASN][1000 genomes]
rs10481172	0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10505532	0.94[ASN][1000 genomes]
rs10505533	0.94[ASN][1000 genomes]
rs10505534	0.94[ASN][1000 genomes]
rs10808573	0.94[ASN][1000 genomes]
rs10808576	0.81[EUR][1000 genomes]
rs10956460	0.86[ASN][1000 genomes]
rs11776007	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13264853	0.87[EUR][1000 genomes]
rs1372445	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1372446	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1372454	0.89[ASN][1000 genomes]
rs1441987	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1441991	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1866980	0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2028514	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2028515	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35157858	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4266613	0.82[EUR][1000 genomes]
rs4326354	0.82[EUR][1000 genomes]
rs4367496	0.84[ASN][1000 genomes]
rs4487715	0.80[EUR][1000 genomes]
rs4628228	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6470673	0.89[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6470675	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6470685	0.81[EUR][1000 genomes]
rs6470688	0.87[ASN][1000 genomes]
rs6470691	0.80[EUR][1000 genomes]
rs6989876	0.86[ASN][1000 genomes]
rs7003201	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7008734	0.81[EUR][1000 genomes]
rs7015312	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7016655	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7017891	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7018297	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs766811	0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7818239	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7822165	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7827792	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7827975	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7833433	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7836274	0.84[EUR][1000 genomes]
rs7836420	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7843646	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7843900	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9297780	0.83[EUR][1000 genomes]
rs9297781	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130002200-130015600	Weak transcription	Fetal Thymus	thymus
2	chr8:130004400-130009000	Weak transcription	Dnd41	blood
3	chr8:130005400-130007000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr8:130006000-130006800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links