Variant report

Variant	rs144313255
Chromosome Location	chr15:62156804-62156805
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:62148662..62150892-chr15:62154836..62157768,2	K562	blood:

Variant related genes	Relation type
ENSG00000129003	Chromatin interaction

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv904284	chr15:62123600-62243197	Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
2	nsv521334	chr15:62129809-62340126	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
3	nsv527451	chr15:62129809-62340126	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
4	nsv904285	chr15:62146598-62246864	Weak transcription Strong transcription Active TSS ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
5	nsv904286	chr15:62146598-62313373	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
6	nsv904287	chr15:62146598-62338797	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
7	nsv904288	chr15:62146598-62356386	Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
8	nsv569641	chr15:62155282-62287456	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
9	nsv904289	chr15:62156690-62287456	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:62132400-62159000	Weak transcription	HSMM	muscle
2	chr15:62132400-62171200	Weak transcription	HMEC	breast
3	chr15:62135000-62161600	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr15:62138800-62184200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr15:62139200-62182200	Weak transcription	Brain Substantia Nigra	brain
6	chr15:62139800-62185200	Weak transcription	NHLF	lung
7	chr15:62140000-62184800	Weak transcription	Right Ventricle	heart
8	chr15:62140200-62180000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr15:62141200-62165400	Weak transcription	Brain Hippocampus Middle	brain
10	chr15:62141400-62160600	Weak transcription	Placenta	Placenta
11	chr15:62141400-62161400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr15:62141600-62161400	Weak transcription	Sigmoid Colon	Sigmoid Colon
13	chr15:62141600-62165000	Weak transcription	Thymus	Thymus
14	chr15:62142000-62165000	Weak transcription	Gastric	stomach
15	chr15:62142000-62209400	Weak transcription	Colonic Mucosa	Colon
16	chr15:62142200-62161600	Weak transcription	Fetal Stomach	stomach
17	chr15:62142200-62162800	Weak transcription	Hela-S3	cervix
18	chr15:62142400-62160800	Weak transcription	Fetal Muscle Trunk	muscle
19	chr15:62142400-62163800	Weak transcription	Brain Inferior Temporal Lobe	brain
20	chr15:62142400-62253000	Weak transcription	Spleen	Spleen
21	chr15:62142600-62209200	Weak transcription	K562	blood
22	chr15:62143000-62164000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr15:62143800-62182200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr15:62143800-62235600	Weak transcription	Fetal Brain Male	brain
25	chr15:62144000-62159800	Weak transcription	Osteobl	bone
26	chr15:62144000-62194600	Weak transcription	Fetal Lung	lung
27	chr15:62144200-62160600	Weak transcription	Fetal Thymus	thymus
28	chr15:62144800-62161400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
29	chr15:62144800-62162400	Weak transcription	Rectal Smooth Muscle	rectum
30	chr15:62144800-62184000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
31	chr15:62145200-62160600	Weak transcription	Skeletal Muscle Male	skeletal muscle
32	chr15:62145200-62163400	Weak transcription	Brain Cingulate Gyrus	brain
33	chr15:62145200-62182000	Weak transcription	NHEK	skin
34	chr15:62145400-62171600	Weak transcription	Stomach Mucosa	stomach
35	chr15:62145800-62182000	Weak transcription	Small Intestine	intestine
36	chr15:62146800-62230000	Weak transcription	Pancreas	Pancrea
37	chr15:62147000-62161800	Weak transcription	NHDF-Ad	bronchial
38	chr15:62147000-62162800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr15:62147000-62181800	Weak transcription	Brain Anterior Caudate	brain
40	chr15:62147000-62184000	Weak transcription	Lung	lung
41	chr15:62147200-62158400	Weak transcription	Rectal Mucosa Donor 31	rectum
42	chr15:62147200-62160800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
43	chr15:62147200-62161400	Weak transcription	Fetal Muscle Leg	muscle
44	chr15:62147200-62164600	Weak transcription	Cortex derived primary cultured neurospheres	brain
45	chr15:62147200-62165200	Weak transcription	Colon Smooth Muscle	Colon
46	chr15:62147400-62162600	Weak transcription	Stomach Smooth Muscle	stomach
47	chr15:62147600-62161400	Weak transcription	Skeletal Muscle Female	skeletal muscle
48	chr15:62147800-62160600	Weak transcription	Duodenum Smooth Muscle	Duodenum
49	chr15:62147800-62162400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
50	chr15:62147800-62184000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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