Variant report
Variant | rs144330587 |
---|---|
Chromosome Location | chr5:58653592-58653593 |
allele | A/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:58646200-58654400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
2 | chr5:58648000-58654200 | Weak transcription | Ovary | ovary |
3 | chr5:58648600-58653800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
4 | chr5:58649400-58653600 | Weak transcription | Brain Anterior Caudate | brain |
5 | chr5:58649400-58653600 | Weak transcription | Brain Substantia Nigra | brain |
6 | chr5:58649400-58654000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
7 | chr5:58649400-58654200 | Active TSS | Skeletal Muscle Female | skeletal muscle |
8 | chr5:58649600-58653600 | Active TSS | Skeletal Muscle Male | skeletal muscle |
9 | chr5:58652000-58654400 | Flanking Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
10 | chr5:58652200-58653600 | Enhancers | Rectal Smooth Muscle | rectum |
11 | chr5:58652200-58654400 | Enhancers | Fetal Lung | lung |
12 | chr5:58652200-58654800 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
13 | chr5:58652200-58654800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
14 | chr5:58652200-58655000 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
15 | chr5:58652200-58655000 | Enhancers | Fetal Intestine Small | intestine |
16 | chr5:58652200-58656200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
17 | chr5:58652200-58656600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
18 | chr5:58652400-58653800 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
19 | chr5:58652400-58653800 | Enhancers | Primary T cells from cord blood | blood |
20 | chr5:58652400-58654400 | Enhancers | Fetal Intestine Large | intestine |
21 | chr5:58652400-58654800 | Enhancers | H1 Cell Line | embryonic stem cell |
22 | chr5:58652400-58655000 | Enhancers | Stomach Mucosa | stomach |
23 | chr5:58652400-58655200 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
24 | chr5:58652400-58655200 | Enhancers | Fetal Kidney | kidney |
25 | chr5:58652400-58655800 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
26 | chr5:58652400-58656400 | Enhancers | HUES64 Cell Line | embryonic stem cell |
27 | chr5:58652600-58653800 | Enhancers | Placenta | Placenta |
28 | chr5:58652600-58654200 | Enhancers | Brain Angular Gyrus | brain |
29 | chr5:58652600-58654600 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
30 | chr5:58652600-58654600 | Enhancers | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
31 | chr5:58652600-58654600 | Enhancers | Fetal Muscle Leg | muscle |
32 | chr5:58652600-58654600 | Enhancers | Fetal Stomach | stomach |
33 | chr5:58652600-58654600 | Enhancers | Fetal Thymus | thymus |
34 | chr5:58652600-58654600 | Enhancers | Pancreas | Pancrea |
35 | chr5:58652600-58654800 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
36 | chr5:58652600-58654800 | Enhancers | Gastric | stomach |
37 | chr5:58652600-58654800 | Enhancers | Placenta Amnion | Placenta Amnion |
38 | chr5:58652600-58655000 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
39 | chr5:58652600-58655000 | Enhancers | Brain Hippocampus Middle | brain |
40 | chr5:58652600-58655000 | Enhancers | Brain Inferior Temporal Lobe | brain |
41 | chr5:58652600-58655200 | Enhancers | Fetal Brain Male | brain |
42 | chr5:58652600-58655800 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
43 | chr5:58652800-58653800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
44 | chr5:58652800-58654600 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
45 | chr5:58652800-58654600 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
46 | chr5:58652800-58656400 | Enhancers | HUES6 Cell Line | embryonic stem cell |
47 | chr5:58653000-58653600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
48 | chr5:58653000-58653600 | Flanking Active TSS | Fetal Heart | heart |
49 | chr5:58653000-58653800 | Weak transcription | Brain Germinal Matrix | brain |
50 | chr5:58653000-58654000 | Weak transcription | H9 Cell Line | embryonic stem cell |