Variant report

Variant nsv881704
Chromosome Location chr5:58653383-58675538
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:284 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:58646200-58654400 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr5:58648000-58654200 Weak transcription Ovary ovary
3 chr5:58648600-58653400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr5:58648600-58653800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr5:58649400-58653600 Weak transcription Brain Anterior Caudate brain
6 chr5:58649400-58653600 Weak transcription Brain Substantia Nigra brain
7 chr5:58649400-58654000 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr5:58649400-58654200 Active TSS Skeletal Muscle Female skeletal muscle
9 chr5:58649600-58653600 Active TSS Skeletal Muscle Male skeletal muscle
10 chr5:58652000-58653400 Flanking Active TSS A549 lung
11 chr5:58652000-58654400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr5:58652200-58653400 Enhancers Primary hematopoietic stem cells blood
13 chr5:58652200-58653600 Enhancers Rectal Smooth Muscle rectum
14 chr5:58652200-58654400 Enhancers Fetal Lung lung
15 chr5:58652200-58654800 Enhancers ES-I3 Cell Line embryonic stem cell
16 chr5:58652200-58654800 Enhancers iPS-15b Cell Line embryonic stem cell
17 chr5:58652200-58655000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr5:58652200-58655000 Enhancers Fetal Intestine Small intestine
19 chr5:58652200-58656200 Enhancers iPS-18 Cell Line embryonic stem cell
20 chr5:58652200-58656600 Enhancers HUES48 Cell Line embryonic stem cell
21 chr5:58652400-58653400 Enhancers Colon Smooth Muscle Colon
22 chr5:58652400-58653800 Enhancers iPS-20b Cell Line embryonic stem cell
23 chr5:58652400-58653800 Enhancers Primary T cells from cord blood blood
24 chr5:58652400-58654400 Enhancers Fetal Intestine Large intestine
25 chr5:58652400-58654800 Enhancers H1 Cell Line embryonic stem cell
26 chr5:58652400-58655000 Enhancers Stomach Mucosa stomach
27 chr5:58652400-58655200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr5:58652400-58655200 Enhancers Fetal Kidney kidney
29 chr5:58652400-58655800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr5:58652400-58656400 Enhancers HUES64 Cell Line embryonic stem cell
31 chr5:58652600-58653800 Enhancers Placenta Placenta
32 chr5:58652600-58654200 Enhancers Brain Angular Gyrus brain
33 chr5:58652600-58654600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr5:58652600-58654600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr5:58652600-58654600 Enhancers Fetal Muscle Leg muscle
36 chr5:58652600-58654600 Enhancers Fetal Stomach stomach
37 chr5:58652600-58654600 Enhancers Fetal Thymus thymus
38 chr5:58652600-58654600 Enhancers Pancreas Pancrea
39 chr5:58652600-58654800 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr5:58652600-58654800 Enhancers Gastric stomach
41 chr5:58652600-58654800 Enhancers Placenta Amnion Placenta Amnion
42 chr5:58652600-58655000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
43 chr5:58652600-58655000 Enhancers Brain Hippocampus Middle brain
44 chr5:58652600-58655000 Enhancers Brain Inferior Temporal Lobe brain
45 chr5:58652600-58655200 Enhancers Fetal Brain Male brain
46 chr5:58652600-58655800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
47 chr5:58652800-58653400 Enhancers Psoas Muscle Psoas
48 chr5:58652800-58653400 Active TSS Stomach Smooth Muscle stomach
49 chr5:58652800-58653800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr5:58652800-58654600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell

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