Variant report

Variant	rs1443397
Chromosome Location	chr3:157264131-157264132
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11915662	1.00[EUR][1000 genomes]
rs12632661	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12634308	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12634442	1.00[CEU][hapmap]
rs12637783	1.00[EUR][1000 genomes]
rs12638497	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1443394	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1443396	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16827818	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16827850	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4588317	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7432732	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9790270	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:157262600-157289200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr3:157263800-157264600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr3:157263800-157265600	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr3:157263800-157271600	Weak transcription	Adipose Nuclei	Adipose

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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