Variant report

Variant	rs1456863
Chromosome Location	chr4:62213988-62213989
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs13132034	0.85[CEU][hapmap];1.00[MEX][hapmap];0.80[EUR][1000 genomes]
rs13139413	1.00[EUR][1000 genomes]
rs13150558	0.85[CEU][hapmap];0.89[TSI][hapmap];0.84[EUR][1000 genomes]
rs34639673	0.84[EUR][1000 genomes]
rs34973110	0.80[EUR][1000 genomes]
rs35078913	0.84[EUR][1000 genomes]
rs35872772	0.86[AFR][1000 genomes]
rs36082269	0.84[EUR][1000 genomes]
rs66647264	0.84[EUR][1000 genomes]
rs67991398	0.84[EUR][1000 genomes]
rs72634751	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879075	chr4:62124531-62354791	Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Weak transcription Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv461376	chr4:62187646-62274626	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv594327	chr4:62187646-62274626	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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