Variant report

Variant	rs1458909
Chromosome Location	chr8:34270947-34270948
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 57 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:57)

rs_ID	r²[population]
rs10089816	0.86[EUR][1000 genomes]
rs10100684	0.86[EUR][1000 genomes]
rs10101147	0.89[EUR][1000 genomes]
rs10110278	0.86[EUR][1000 genomes]
rs10112924	0.88[EUR][1000 genomes]
rs1014493	0.91[EUR][1000 genomes]
rs10447956	0.90[EUR][1000 genomes]
rs11990673	0.89[EUR][1000 genomes]
rs12541738	0.90[EUR][1000 genomes]
rs13264902	0.84[EUR][1000 genomes]
rs13272790	0.83[EUR][1000 genomes]
rs13277369	0.90[EUR][1000 genomes]
rs13280754	0.89[EUR][1000 genomes]
rs1348639	0.87[ASN][1000 genomes]
rs1348640	0.86[EUR][1000 genomes]
rs1373803	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1445182	0.91[EUR][1000 genomes]
rs1445183	0.91[EUR][1000 genomes]
rs1458910	0.91[EUR][1000 genomes]
rs1562182	0.91[EUR][1000 genomes]
rs1978999	0.90[EUR][1000 genomes]
rs1979298	0.90[EUR][1000 genomes]
rs2120917	0.91[EUR][1000 genomes]
rs2120919	0.90[EUR][1000 genomes]
rs2590455	0.91[EUR][1000 genomes]
rs2590456	0.84[EUR][1000 genomes]
rs2590457	0.91[EUR][1000 genomes]
rs2590459	0.91[EUR][1000 genomes]
rs2590460	0.91[EUR][1000 genomes]
rs2609592	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2609604	0.91[EUR][1000 genomes]
rs2609605	0.91[EUR][1000 genomes]
rs2609613	0.91[EUR][1000 genomes]
rs2719287	0.90[EUR][1000 genomes]
rs2719298	0.96[AFR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2719317	0.91[EUR][1000 genomes]
rs28521494	0.84[EUR][1000 genomes]
rs4308727	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4322005	0.89[EUR][1000 genomes]
rs4475478	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4475479	0.89[EUR][1000 genomes]
rs4739566	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6468255	0.87[EUR][1000 genomes]
rs6468256	0.85[EUR][1000 genomes]
rs6468257	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6985772	0.88[EUR][1000 genomes]
rs6986938	0.88[EUR][1000 genomes]
rs6988429	0.89[EUR][1000 genomes]
rs6988737	0.89[EUR][1000 genomes]
rs7011041	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7812560	0.89[EUR][1000 genomes]
rs7822096	0.86[EUR][1000 genomes]
rs7823416	0.92[CEU][hapmap];0.82[EUR][1000 genomes]
rs7841483	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7842180	0.89[EUR][1000 genomes]
rs7843364	0.89[EUR][1000 genomes]
rs958085	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:34269600-34278800	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr8:34270400-34276400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr8:34270600-34272200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr8:34270800-34271400	Weak transcription	Placenta Amnion	Placenta Amnion

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