Variant report

Variant rs146304500
Chromosome Location chr5:180235330-180235331
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180230600-180237000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
2 chr5:180230800-180236200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
3 chr5:180231200-180236000 Genic enhancers Placenta Placenta
4 chr5:180231200-180236200 Genic enhancers Fetal Muscle Leg muscle
5 chr5:180231600-180235400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr5:180231600-180235600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr5:180231800-180235800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr5:180232000-180235600 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr5:180232800-180236800 Flanking Active TSS Primary B cells from cord blood blood
10 chr5:180232800-180236800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
11 chr5:180233000-180236000 Enhancers Stomach Mucosa stomach
12 chr5:180233200-180236000 Genic enhancers Left Ventricle heart
13 chr5:180233200-180236400 Enhancers Fetal Heart heart
14 chr5:180233200-180236400 Enhancers Pancreas Pancrea
15 chr5:180233200-180236600 Flanking Active TSS Primary T cells from cord blood blood
16 chr5:180233200-180237000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr5:180233400-180235600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
18 chr5:180233400-180235800 Genic enhancers Lung lung
19 chr5:180233400-180236200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
20 chr5:180233400-180236200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
21 chr5:180233400-180236200 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
22 chr5:180233400-180236200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
23 chr5:180233400-180236200 Flanking Active TSS Brain Angular Gyrus brain
24 chr5:180233400-180236200 Flanking Active TSS Brain Hippocampus Middle brain
25 chr5:180233400-180236200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
26 chr5:180233400-180236400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
27 chr5:180233400-180236400 Enhancers Small Intestine intestine
28 chr5:180233400-180236600 Flanking Active TSS Brain Inferior Temporal Lobe brain
29 chr5:180233400-180236600 Flanking Active TSS Hela-S3 cervix
30 chr5:180233400-180236800 Flanking Active TSS Primary T cells fromperipheralblood blood
31 chr5:180233400-180236800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
32 chr5:180233400-180236800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
33 chr5:180233400-180236800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
34 chr5:180233600-180235400 Enhancers Muscle Satellite Cultured Cells --
35 chr5:180233600-180235600 Genic enhancers Fetal Stomach stomach
36 chr5:180233600-180236400 Enhancers Placenta Amnion Placenta Amnion
37 chr5:180233600-180236800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
38 chr5:180233600-180236800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
39 chr5:180233600-180236800 Flanking Active TSS Liver Liver
40 chr5:180233800-180235400 Enhancers Gastric stomach
41 chr5:180233800-180235800 Enhancers Sigmoid Colon Sigmoid Colon
42 chr5:180233800-180236000 Enhancers Psoas Muscle Psoas
43 chr5:180233800-180236200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr5:180233800-180236200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr5:180233800-180236800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr5:180234000-180235800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr5:180234000-180236000 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
48 chr5:180234000-180236200 Flanking Active TSS Brain Germinal Matrix brain
49 chr5:180234000-180236400 Flanking Active TSS Fetal Brain Female brain
50 chr5:180234000-180236800 Flanking Active TSS Rectal Mucosa Donor 31 rectum

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