Variant report
| Variant | rs1463516 |
|---|---|
| Chromosome Location | chr3:115946125-115946126 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:12)
| rs_ID | r2[population] |
|---|---|
| rs1920369 | 1.00[CEU][hapmap] |
| rs2141625 | 1.00[CEU][hapmap] |
| rs56964012 | 1.00[EUR][1000 genomes] |
| rs58820760 | 1.00[EUR][1000 genomes] |
| rs60062033 | 1.00[EUR][1000 genomes] |
| rs60082801 | 1.00[EUR][1000 genomes] |
| rs61244371 | 1.00[EUR][1000 genomes] |
| rs72961512 | 1.00[EUR][1000 genomes] |
| rs72961514 | 1.00[EUR][1000 genomes] |
| rs72961517 | 1.00[EUR][1000 genomes] |
| rs7609815 | 0.82[AFR][1000 genomes] |
| rs9681792 | 1.00[CEU][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv877360 | chr3:115916171-116023990 | Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
