Variant report

Variant	rs146756600
Chromosome Location	chr8:50827748-50827749
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3353749	chr8:50530807-51139242	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv916392	chr8:50827638-51395140	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:50821600-50829000	Active TSS	Brain Germinal Matrix	brain
2	chr8:50821800-50827800	Active TSS	Pancreatic Islets	Pancreatic Islet
3	chr8:50821800-50828600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr8:50822000-50828400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr8:50823400-50828400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
6	chr8:50824000-50828600	Active TSS	Brain Anterior Caudate	brain
7	chr8:50824600-50831600	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr8:50824800-50830000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr8:50825000-50831800	Weak transcription	H1 Cell Line	embryonic stem cell
10	chr8:50826200-50828600	Active TSS	Fetal Brain Female	brain
11	chr8:50826600-50830000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
12	chr8:50826800-50829800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr8:50826800-50830000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
14	chr8:50826800-50830000	Weak transcription	Brain Inferior Temporal Lobe	brain
15	chr8:50827000-50828400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr8:50827200-50829800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr8:50827200-50829800	Weak transcription	HUES64 Cell Line	embryonic stem cell
18	chr8:50827600-50828200	Enhancers	Cortex derived primary cultured neurospheres	brain
19	chr8:50827600-50829600	Weak transcription	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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