Variant report
Variant | nsv916392 |
---|---|
Chromosome Location | chr8:50827638-51395140 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1960)
- CpG islands (count:1040)
- Chromatin interactive region (count:38)
- LncRNA region (count:5)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr8:51351100-51351279 | HepG2 | liver: | n/a | n/a |
2 | ATF1 | chr8:51210088-51210191 | K562 | blood: | n/a | n/a |
3 | ATF2 | chr8:50968957-50969420 | GM12878 | blood: | n/a | n/a |
4 | ATF2 | chr8:50969058-50969384 | GM12878 | blood: | n/a | n/a |
5 | ATF3 | chr8:51310791-51311060 | H1-hESC | embryonic stem cell: | n/a | n/a |
6 | ATF3 | chr8:51310845-51311121 | K562 | blood: | n/a | n/a |
7 | ATF3 | chr8:51310742-51311085 | H1-hESC | embryonic stem cell: | n/a | n/a |
8 | BACH1 | chr8:50867988-50868444 | H1-hESC | embryonic stem cell: | n/a | n/a |
9 | BACH1 | chr8:51380375-51380444 | K562 | blood: | n/a | n/a |
10 | BACH1 | chr8:51204453-51204562 | H1-hESC | embryonic stem cell: | n/a | n/a |
11 | BACH1 | chr8:51322783-51322854 | H1-hESC | embryonic stem cell: | n/a | n/a |
12 | BACH1 | chr8:51360829-51360868 | H1-hESC | embryonic stem cell: | n/a | n/a |
13 | BACH1 | chr8:50867209-50867386 | H1-hESC | embryonic stem cell: | n/a | n/a |
14 | BACH1 | chr8:50892249-50892339 | H1-hESC | embryonic stem cell: | n/a | n/a |
15 | BATF | chr8:51057978-51058142 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr8:50969021-50969265 | GM12878 | blood: | n/a | n/a |
17 | BCL11A | chr8:50969028-50969333 | GM12878 | blood: | n/a | n/a |
18 | BCL11A | chr8:50969022-50969362 | GM12878 | blood: | n/a | n/a |
19 | BHLHE40 | chr8:51038532-51038842 | GM12878 | blood: | n/a | chr8:51038771-51038792 |
20 | BHLHE40 | chr8:51310826-51311066 | K562 | blood: | n/a | n/a |
21 | BHLHE40 | chr8:51310789-51311051 | HepG2 | liver: | n/a | n/a |
22 | BHLHE40 | chr8:50969028-50969399 | GM12878 | blood: | n/a | n/a |
23 | BRCA1 | chr8:50873303-50873331 | HepG2 | liver: | n/a | n/a |
24 | BRCA1 | chr8:51310893-51310975 | H1-hESC | embryonic stem cell: | n/a | n/a |
25 | BRCA1 | chr8:50999011-50999073 | Hela-S3 | cervix: | n/a | n/a |
26 | BRCA1 | chr8:50968793-50969924 | Hela-S3 | cervix: | n/a | n/a |
27 | CEBPB | chr8:50886853-50887178 | A549 | lung: | n/a | chr8:50887017-50887028 |
28 | CEBPB | chr8:50844206-50844462 | MCF-7 | breast: | n/a | chr8:50844305-50844316 |
29 | CEBPB | chr8:50844116-50844485 | Hela-S3 | cervix: | n/a | chr8:50844305-50844316 |
30 | CEBPB | chr8:50892506-50892785 | A549 | lung: | n/a | chr8:50892652-50892663 |
31 | CEBPB | chr8:50855601-50855816 | HepG2 | liver: | n/a | chr8:50855669-50855680 |
32 | CEBPB | chr8:51320425-51320659 | HepG2 | liver: | n/a | chr8:51320549-51320560 |
33 | CEBPB | chr8:51212610-51212958 | IMR90 | lung: | n/a | n/a |
34 | CEBPB | chr8:51212701-51212837 | H1-hESC | embryonic stem cell: | n/a | n/a |
35 | CEBPB | chr8:51295153-51295450 | A549 | lung: | n/a | chr8:51295254-51295263 chr8:51295252-51295263 chr8:51295254-51295265 |
36 | CEBPB | chr8:50898826-50899188 | IMR90 | lung: | n/a | chr8:50899007-50899018 chr8:50899008-50899017 chr8:50899006-50899019 chr8:50899006-50899017 chr8:50899008-50899017 chr8:50899008-50899017 chr8:50899008-50899017 chr8:50899006-50899019 |
37 | CEBPB | chr8:50941263-50941546 | IMR90 | lung: | n/a | chr8:50941381-50941392 |
38 | CEBPB | chr8:51153154-51153293 | H1-hESC | embryonic stem cell: | n/a | chr8:51153238-51153251 |
39 | CEBPB | chr8:51013698-51013774 | A549 | lung: | n/a | n/a |
40 | CEBPB | chr8:51167350-51167687 | MCF-7 | breast: | n/a | chr8:51167453-51167470 |
41 | CEBPB | chr8:50941250-50941558 | HepG2 | liver: | n/a | chr8:50941381-50941392 |
42 | CEBPB | chr8:51176175-51176483 | IMR90 | lung: | n/a | chr8:51176300-51176311 |
43 | CEBPB | chr8:50980388-50980486 | K562 | blood: | n/a | n/a |
44 | CEBPB | chr8:50997569-50997735 | H1-hESC | embryonic stem cell: | n/a | n/a |
45 | CEBPB | chr8:51184339-51184584 | H1-hESC | embryonic stem cell: | n/a | n/a |
46 | CEBPB | chr8:50946736-50947055 | HepG2 | liver: | n/a | chr8:50946882-50946893 |
47 | CEBPB | chr8:50952403-50952800 | Hela-S3 | cervix: | n/a | chr8:50952625-50952636 chr8:50952624-50952641 chr8:50952625-50952638 |
48 | CEBPB | chr8:51310770-51311151 | H1-hESC | embryonic stem cell: | n/a | chr8:51310953-51310964 |
49 | CEBPB | chr8:50879850-50880092 | MCF-7 | breast: | n/a | n/a |
50 | CEBPB | chr8:51052112-51052647 | Hela-S3 | cervix: | n/a | chr8:51052494-51052505 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:50892893-50892943 | HEK293 | kidney: | embryo |
2 | chr8:51039471-51039521 | CMK | blood: | n/a |
3 | chr8:51199947-51199997 | MCF10A-Er-Src | breast: | n/a |
4 | chr8:50892893-50892943 | HEK293 | kidney: | embryo |
5 | chr8:51039471-51039521 | CMK | blood: | n/a |
6 | chr8:51199947-51199997 | MCF10A-Er-Src | breast: | n/a |
7 | chr8:50968578-50968628 | LNCaP | prostate: | n/a |
8 | chr8:50847816-50847866 | ovcar-3 | ovarian: | n/a |
9 | chr8:50891767-50891817 | HCT-116 | colon: | n/a |
10 | chr8:51039471-51039521 | HCPEpiC | choroid plexus: | n/a |
11 | chr8:50891767-50891817 | Jurkat | blood: | n/a |
12 | chr8:51039471-51039521 | ECC-1 | luminal epithelium: | n/a |
13 | chr8:50875600-50875650 | PANC-1 | pancreas: | n/a |
14 | chr8:50947399-50947449 | HEK293 | kidney: | embryo |
15 | chr8:50904638-50904688 | GM12891 | blood: | n/a |
16 | chr8:50875600-50875650 | SKMC | muscle: | n/a |
17 | chr8:50980859-50980909 | SK-N-SH | brain: | n/a |
18 | chr8:50980859-50980909 | SK-N-SH_RA | brain: | n/a |
19 | chr8:51095593-51095643 | SK-N-SH_RA | brain: | n/a |
20 | chr8:50904638-50904688 | U87 | brain: | n/a |
21 | chr8:50980859-50980909 | NT2-D1 | testis: | n/a |
22 | chr8:50847816-50847866 | K562 | blood: | n/a |
23 | chr8:50891767-50891817 | SK-N-SH_RA | brain: | n/a |
24 | chr8:51288552-51288602 | IMR90 | lung: | fetal |
25 | chr8:50847816-50847866 | HCM | heart: | n/a |
26 | chr8:51199947-51199997 | T-47D | breast: | n/a |
27 | chr8:50837079-50837129 | HRE | kidney: | n/a |
28 | chr8:50947399-50947449 | SK-N-SH | brain: | n/a |
29 | chr8:51364244-51364294 | HRPEpiC | eye: | n/a |
30 | chr8:51199947-51199997 | HCF | heart: | n/a |
31 | chr8:50947399-50947449 | NH-A | brain: | n/a |
32 | chr8:51039471-51039521 | Hela-S3 | cervix: | n/a |
33 | chr8:51364244-51364294 | SK-N-SH | brain: | n/a |
34 | chr8:50891864-50891914 | IMR90 | lung: | fetal |
35 | chr8:51364244-51364294 | NB4 | blood: | n/a |
36 | chr8:50968578-50968628 | GM19239 | blood: | n/a |
37 | chr8:50968578-50968628 | ProgFib | skin: | n/a |
38 | chr8:50947399-50947449 | BE2_C | brain: | n/a |
39 | chr8:50968578-50968628 | PANC-1 | pancreas: | n/a |
40 | chr8:50968578-50968628 | IMR90 | lung: | fetal |
41 | chr8:51095593-51095643 | H1-hESC | embryonic stem cell: | embryo |
42 | chr8:51364244-51364294 | HEK293 | kidney: | embryo |
43 | chr8:50847816-50847866 | HMEC | breast: | n/a |
44 | chr8:51095593-51095643 | HUVEC | blood vessel: | n/a |
45 | chr8:50892893-50892943 | ovcar-3 | ovarian: | n/a |
46 | chr8:51288552-51288602 | K562 | blood: | n/a |
47 | chr8:50980859-50980909 | U87 | brain: | n/a |
48 | chr8:50891864-50891914 | HNPCEpiC | eye: | n/a |
49 | chr8:50892702-50892752 | H1-hESC | embryonic stem cell: | embryo |
50 | chr8:50904638-50904688 | HRE | kidney: | n/a |
(count:38 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:51030711..51032424-chr8:51036929..51039858,2 | MCF-7 | breast: | |
2 | chr8:50753724..50754320-chr8:51310816..51311345,2 | MCF-7 | breast: | |
3 | chr1:144893909..144894771-chr8:51229590..51230343,2 | MCF-7 | breast: | |
4 | chr8:51194558..51197541-chr8:51202196..51204695,2 | MCF-7 | breast: | |
5 | chr8:51219065..51222213-chr8:51225649..51228332,3 | K562 | blood: | |
6 | chr8:50832548..50835126-chr8:50839783..50841421,2 | K562 | blood: | |
7 | chr8:50947077..50947745-chr8:51310573..51311162,2 | MCF-7 | breast: | |
8 | chr8:50861606..50863840-chr8:50871624..50874600,2 | MCF-7 | breast: | |
9 | chr8:50858643..50860623-chr8:50860794..50862890,2 | K562 | blood: | |
10 | chr13:32746778..32747333-chr8:51314361..51315226,2 | MCF-7 | breast: | |
11 | chr8:50925829..50927969-chr8:50932438..50935189,2 | MCF-7 | breast: | |
12 | chr8:51187159..51189399-chr8:51189828..51191872,2 | MCF-7 | breast: | |
13 | chr8:51050537..51053146-chr8:51056966..51059260,2 | K562 | blood: | |
14 | chr8:49891255..49891972-chr8:51310445..51311051,2 | MCF-7 | breast: | |
15 | chr8:50947077..50947745-chr8:51310573..51311162,2 | MCF-7 | breast: | |
16 | chr8:50861606..50863840-chr8:50871624..50874600,2 | MCF-7 | breast: | |
17 | chr8:51252100..51253925-chr8:51256216..51258662,2 | MCF-7 | breast: | |
18 | chr8:50709168..50710848-chr8:50931158..50933465,2 | MCF-7 | breast: | |
19 | chr8:51187159..51189399-chr8:51189828..51191872,2 | MCF-7 | breast: | |
20 | chr8:50988839..50990732-chr8:50993883..50996257,2 | K562 | blood: | |
21 | chr8:51252100..51253925-chr8:51256216..51258662,2 | MCF-7 | breast: | |
22 | chr8:51194558..51197541-chr8:51202196..51204695,2 | MCF-7 | breast: | |
23 | chr8:51372315..51374214-chr8:51375832..51377998,2 | K562 | blood: | |
24 | chr8:50858643..50860623-chr8:50860794..50862890,2 | K562 | blood: | |
25 | chr8:50826287..50827033-chr8:51310198..51311230,3 | MCF-7 | breast: | |
26 | chr8:50906818..50909515-chr8:50916418..50918690,2 | K562 | blood: | |
27 | chr8:50988839..50990732-chr8:50993883..50996257,2 | K562 | blood: | |
28 | chr8:50947214..50948091-chr8:51310516..51311364,3 | MCF-7 | breast: | |
29 | chr8:50851071..50853810-chr8:50856546..50858320,2 | MCF-7 | breast: | |
30 | chr8:51219065..51222213-chr8:51225649..51228332,3 | K562 | blood: | |
31 | chr8:50906818..50909515-chr8:50916418..50918690,2 | K562 | blood: | |
32 | chr8:50851071..50853810-chr8:50856546..50858320,2 | MCF-7 | breast: | |
33 | chr8:50947214..50948091-chr8:51310516..51311364,3 | MCF-7 | breast: | |
34 | chr8:50832548..50835126-chr8:50839783..50841421,2 | K562 | blood: | |
35 | chr8:51050537..51053146-chr8:51056966..51059260,2 | K562 | blood: | |
36 | chr8:51372315..51374214-chr8:51375832..51377998,2 | K562 | blood: | |
37 | chr8:51030711..51032424-chr8:51036929..51039858,2 | MCF-7 | breast: | |
38 | chr8:50925829..50927969-chr8:50932438..50935189,2 | MCF-7 | breast: |
(count:5 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-C8orf22-15 | chr8:51085121-51085195 | NONHSAT126524 |
2 | lnc-C8orf22-6 | chr8:51294466-51294835 | ENSG00000253849.1 |
3 | lnc-C8orf22-15 | chr8:51199098-51199413 | NONHSAT126524 |
4 | lnc-C8orf22-14 | chr8:51076059-51076529 | NONHSAT126523 |
5 | lnc-C8orf22-6 | chr8:51293575-51293638 | ENSG00000253849.1 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000253849 | TF binding region |
SNTG1 | TF binding region |
ENSG00000253849 | CpG island |
SNTG1 | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs549769017 | chr8:50827702-50827703 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
2 | rs139576260 | chr8:50827726-50827727 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
3 | rs149711213 | chr8:50827735-50827736 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
4 | rs146756600 | chr8:50827748-50827749 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
5 | rs191217557 | chr8:50827773-50827774 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
6 | rs563349778 | chr8:50827776-50827777 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
7 | rs114487119 | chr8:50827831-50827832 | Weak transcription Enhancers Active TSS Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
8 | rs557656153 | chr8:50827834-50827835 | Weak transcription Enhancers Active TSS Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
9 | rs573819522 | chr8:50827863-50827864 | Weak transcription Enhancers Active TSS Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
10 | rs182961701 | chr8:50827974-50827975 | Weak transcription Enhancers Active TSS Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
11 | rs1486258 | chr8:50827976-50827977 | Weak transcription Enhancers Active TSS Flanking Active TSS | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
12 | rs527674683 | chr8:50827980-50827981 | Weak transcription Enhancers Active TSS Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
13 | rs552192010 | chr8:50827992-50827993 | Weak transcription Enhancers Active TSS Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
14 | rs2450290 | chr8:50828008-50828009 | Weak transcription Enhancers Active TSS | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
15 | rs188301139 | chr8:50828049-50828050 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
16 | rs561517072 | chr8:50828081-50828082 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
17 | rs568657464 | chr8:50828100-50828101 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
18 | rs535736346 | chr8:50828126-50828127 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
19 | rs192815989 | chr8:50828129-50828130 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
20 | rs566423949 | chr8:50828150-50828151 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
21 | rs539432916 | chr8:50828214-50828215 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
22 | rs371197613 | chr8:50828231-50828232 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
23 | rs557820578 | chr8:50828247-50828248 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
24 | rs375452842 | chr8:50828266-50828267 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
25 | rs376321341 | chr8:50828269-50828270 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
26 | rs370713540 | chr8:50828270-50828271 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
27 | rs78066771 | chr8:50828279-50828280 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
28 | rs542130145 | chr8:50828301-50828302 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
29 | rs540915177 | chr8:50828304-50828305 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
30 | rs68134005 | chr8:50828356-50828357 | Weak transcription Enhancers Active TSS | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
31 | rs183117628 | chr8:50828362-50828363 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
32 | rs187765573 | chr8:50828365-50828366 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
33 | rs545768142 | chr8:50828374-50828375 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
34 | rs564157983 | chr8:50828381-50828382 | Weak transcription Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
35 | rs2450289 | chr8:50828426-50828427 | Weak transcription Active TSS Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
36 | rs192476283 | chr8:50828441-50828442 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs140372312 | chr8:50828477-50828478 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs529489801 | chr8:50828480-50828481 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs563616166 | chr8:50828497-50828498 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs185015917 | chr8:50828528-50828529 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs533695740 | chr8:50828532-50828533 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs551361253 | chr8:50828558-50828559 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs575393842 | chr8:50828657-50828658 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs140771222 | chr8:50828736-50828737 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs55714316 | chr8:50828739-50828740 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs397688578 | chr8:50828745-50828746 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs370887956 | chr8:50828746-50828747 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs200289794 | chr8:50828748-50828749 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs201529689 | chr8:50828749-50828750 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs202130327 | chr8:50828750-50828751 | Weak transcription Active TSS Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Cancer | 16751803 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Wilms tumour | 21544195 | CNVD |
Gastric cancer | 17908304 | CNVD |
Melanoma | 18172304 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Autism | 19415332 | CNVD |
Malaria | 21533027 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Breast cancer | 21245420 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Liver carcinoma | 19366792 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Seminomas | 18059402 | CNVD |
Autism | 22495311 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Lung cancer | 18438408 | CNVD |
Pancreatic cancer | 21811587 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Developmental delay | 21373258 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Breast cancer | 17603634 | CNVD |
Pancreatic endocrine tumor | 17639061 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Testicular cancer | 18059402 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Salivary gland tumor | 18059337 | CNVD |
Breast cancer | 17133270 | CNVD |
Breast cancer | 21509527 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21858162 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Cancer | 20164919 | CNVD |
primary effusion lymphomas | 17116491 | CNVD |
Esophageal cancer | 20955586 | CNVD |
abnormal development | 18461090 | CNVD |
Cancer | 20164920 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Oral cancer | 21386901 | CNVD |
Uveal melanoma | 21693616 | CNVD |
Langer-Giedion syndrome | 22283845 | CNVD |
Cancer | 21637783 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Breast cancer | 20632083 | CNVD |
Breast cancer | 19602461 | CNVD |
Cancer | 22429812 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Oral cancer | 19627613 | CNVD |
Prostate cancer | 21088497 | CNVD |
colon cancer | 17210682 | CNVD |
Breast cancer | 21264507 | CNVD |
Breast cancer | 22028636 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Gastric cancer | 17167181 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Breast cancer | 16461572 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Medulloblastoma | 16968546 | CNVD |
head and neck squamous cell carcinoma | 18028549 | CNVD |
Breast cancer | 17001317 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Prostate cancer | 16461572 | CNVD |
Breast cancer | 16608533 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Hepatocellular carcinoma | 18803288 | CNVD |
Melanoma | 17363583 | CNVD |
Prostate cancer | 18632612 | CNVD |
Glioblastoma multiforme | 18628472 | CNVD |
Sezary syndrome | 18413736 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Congenital anomalies of the kidney and urinary tract | 18316590 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Glioma | 20126413 | CNVD |
Type 1 diabetes | 21085585 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
22q11 deletion syndrome | 20357662 | CNVD |
Medulloblastoma | 21163964 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:50821600-50829000 | Active TSS | Brain Germinal Matrix | brain |
2 | chr8:50821800-50827800 | Active TSS | Pancreatic Islets | Pancreatic Islet |
3 | chr8:50821800-50828600 | Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
4 | chr8:50822000-50828400 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
5 | chr8:50823400-50828400 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
6 | chr8:50824000-50828600 | Active TSS | Brain Anterior Caudate | brain |
7 | chr8:50824600-50831600 | Weak transcription | H9 Cell Line | embryonic stem cell |
8 | chr8:50824800-50830000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
9 | chr8:50825000-50831800 | Weak transcription | H1 Cell Line | embryonic stem cell |
10 | chr8:50826200-50828600 | Active TSS | Fetal Brain Female | brain |
11 | chr8:50826600-50830000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
12 | chr8:50826800-50829800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
13 | chr8:50826800-50830000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
14 | chr8:50826800-50830000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
15 | chr8:50827000-50828400 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
16 | chr8:50827200-50829800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
17 | chr8:50827200-50829800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
18 | chr8:50827600-50828200 | Enhancers | Cortex derived primary cultured neurospheres | brain |
19 | chr8:50827600-50829600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
20 | chr8:50827800-50828000 | Flanking Active TSS | Pancreatic Islets | Pancreatic Islet |
21 | chr8:50828000-50828200 | Active TSS | Pancreatic Islets | Pancreatic Islet |
22 | chr8:50828200-50828800 | Enhancers | Pancreatic Islets | Pancreatic Islet |
23 | chr8:50828200-50829800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
24 | chr8:50828200-50833800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
25 | chr8:50828400-50830000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
26 | chr8:50828600-50831200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
27 | chr8:50828600-50836000 | Weak transcription | Fetal Brain Female | brain |
28 | chr8:50828800-50834200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
29 | chr8:50829000-50829800 | Weak transcription | Brain Germinal Matrix | brain |
30 | chr8:50829600-50830000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
31 | chr8:50829800-50830200 | Active TSS | iPS-20b Cell Line | embryonic stem cell |
32 | chr8:50829800-50830200 | Enhancers | Brain Germinal Matrix | brain |
33 | chr8:50829800-50830600 | Enhancers | HUES6 Cell Line | embryonic stem cell |
34 | chr8:50829800-50830800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
35 | chr8:50829800-50832000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
36 | chr8:50829800-50833400 | Enhancers | HUES64 Cell Line | embryonic stem cell |
37 | chr8:50830000-50830400 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
38 | chr8:50830000-50830400 | Active TSS | Brain Inferior Temporal Lobe | brain |
39 | chr8:50830000-50830400 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
40 | chr8:50830000-50830600 | Flanking Active TSS | HUES48 Cell Line | embryonic stem cell |
41 | chr8:50830000-50830800 | Active TSS | ES-WA7 Cell Line | embryonic stem cell |
42 | chr8:50830000-50833600 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
43 | chr8:50830200-50830600 | Flanking Active TSS | iPS-20b Cell Line | embryonic stem cell |
44 | chr8:50830200-50834800 | Weak transcription | Brain Germinal Matrix | brain |
45 | chr8:50830400-50831200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
46 | chr8:50830600-50831000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
47 | chr8:50830600-50833200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
48 | chr8:50830600-50833400 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
49 | chr8:50830800-50831200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
50 | chr8:50831000-50832400 | Enhancers | HUES6 Cell Line | embryonic stem cell |