Variant report

Variant rs545768142
Chromosome Location chr8:50828374-50828375
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:50821600-50829000 Active TSS Brain Germinal Matrix brain
2 chr8:50821800-50828600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
3 chr8:50822000-50828400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr8:50823400-50828400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
5 chr8:50824000-50828600 Active TSS Brain Anterior Caudate brain
6 chr8:50824600-50831600 Weak transcription H9 Cell Line embryonic stem cell
7 chr8:50824800-50830000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr8:50825000-50831800 Weak transcription H1 Cell Line embryonic stem cell
9 chr8:50826200-50828600 Active TSS Fetal Brain Female brain
10 chr8:50826600-50830000 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr8:50826800-50829800 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr8:50826800-50830000 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr8:50826800-50830000 Weak transcription Brain Inferior Temporal Lobe brain
14 chr8:50827000-50828400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
15 chr8:50827200-50829800 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr8:50827200-50829800 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr8:50827600-50829600 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr8:50828200-50828800 Enhancers Pancreatic Islets Pancreatic Islet
19 chr8:50828200-50829800 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr8:50828200-50833800 Weak transcription Cortex derived primary cultured neurospheres brain

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