The 2.0 version of rSNPBase

Variant report

Variant rs1469871
Chromosome Location chr3:143707175-143707176
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:143692600-143707800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr3:143692800-143714200 Weak transcription Small Intestine intestine
3 chr3:143693400-143708400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr3:143693400-143708400 Weak transcription Psoas Muscle Psoas
5 chr3:143693400-143713800 Weak transcription H9 Cell Line embryonic stem cell
6 chr3:143693600-143711600 Weak transcription Left Ventricle heart
7 chr3:143694000-143708000 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr3:143694400-143708400 Weak transcription Fetal Intestine Small intestine
9 chr3:143694400-143718800 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr3:143694400-143719400 Weak transcription Hela-S3 cervix
11 chr3:143694800-143707200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr3:143695600-143710200 Weak transcription Fetal Brain Male brain
13 chr3:143695600-143716800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr3:143696400-143711600 Weak transcription Fetal Brain Female brain
15 chr3:143696400-143711800 Weak transcription Fetal Intestine Large intestine
16 chr3:143697000-143708000 Weak transcription HUVEC blood vessel
17 chr3:143697000-143708400 Weak transcription K562 blood
18 chr3:143697000-143713400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr3:143697000-143722800 Weak transcription Stomach Smooth Muscle stomach
20 chr3:143697000-143729200 Weak transcription Aorta Aorta
21 chr3:143697200-143708400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr3:143697200-143708400 Weak transcription HMEC breast
23 chr3:143697200-143708400 Weak transcription NHEK skin
24 chr3:143697200-143710200 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr3:143697200-143712000 Weak transcription Adipose Nuclei Adipose
26 chr3:143697200-143723000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr3:143697200-143727800 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr3:143697400-143708400 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr3:143697800-143707800 Weak transcription Primary hematopoietic stem cells blood
30 chr3:143697800-143707800 Weak transcription Dnd41 blood
31 chr3:143697800-143708000 Weak transcription Liver Liver
32 chr3:143698000-143711000 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr3:143698200-143708400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr3:143698400-143708400 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr3:143698400-143708400 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr3:143698400-143721200 Weak transcription Fetal Kidney kidney
37 chr3:143698600-143707800 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr3:143698800-143708400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr3:143699000-143707800 Weak transcription Fetal Lung lung
40 chr3:143699000-143708400 Weak transcription NHLF lung
41 chr3:143699000-143717000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr3:143699200-143737600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr3:143699400-143712200 Weak transcription Muscle Satellite Cultured Cells --
44 chr3:143699400-143714000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr3:143700400-143708400 Weak transcription H1 Cell Line embryonic stem cell
46 chr3:143700400-143720400 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr3:143700600-143708400 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr3:143700600-143708400 Weak transcription HSMMtube muscle
49 chr3:143700800-143708400 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr3:143702000-143707800 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015