| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1046068 |
chr11:5335943-6063742 |
Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
89 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv896939 |
chr11:5497799-5809548 |
Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
48 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv553241 |
chr11:5506034-6203685 |
Genic enhancers Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
74 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1041568 |
chr11:5585716-5765688 |
Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
34 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1053414 |
chr11:5612989-6030212 |
Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
50 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv530216 |
chr11:5614439-6468232 |
Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
90 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv553273 |
chr11:5639873-5871831 |
Strong transcription Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
37 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv1036389 |
chr11:5695451-6177680 |
Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
55 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv540943 |
chr11:5695451-6177680 |
Strong transcription Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
55 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv553277 |
chr11:5722948-6010075 |
Weak transcription Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
36 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
esv1843296 |
chr11:5730377-5970717 |
Flanking Bivalent TSS/Enh Enhancers Strong transcription Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
34 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
esv2758255 |
chr11:5730377-5970717 |
Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
34 gene(s)
|
inside rSNPs
|
diseases
|
| 13 |
esv2759801 |
chr11:5730377-6007613 |
ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
35 gene(s)
|
inside rSNPs
|
diseases
|
| 14 |
nsv896950 |
chr11:5740634-5827540 |
Enhancers Weak transcription ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 15 |
nsv832058 |
chr11:5747594-5926814 |
Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 16 |
esv1827491 |
chr11:5755505-5775501 |
Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 17 |
esv3453553 |
chr11:5758076-5764274 |
ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 18 |
esv989880 |
chr11:5758238-5765079 |
Enhancers Bivalent Enhancer ZNF genes & repeats Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 19 |
esv3503323 |
chr11:5758876-5763474 |
Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 20 |
esv1817137 |
chr11:5759141-5809172 |
ZNF genes & repeats Bivalent Enhancer Enhancers Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 21 |
esv3503327 |
chr11:5759326-5763399 |
ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 22 |
esv3453531 |
chr11:5759401-5763249 |
Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 23 |
nsv553278 |
chr11:5759460-5761219 |
Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 24 |
nsv553279 |
chr11:5759460-5761326 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 25 |
esv2640046 |
chr11:5759512-5763069 |
Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 26 |
esv3453575 |
chr11:5759652-5762704 |
Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 27 |
esv2347807 |
chr11:5759909-5762552 |
ZNF genes & repeats Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 28 |
esv3453509 |
chr11:5759954-5762473 |
Enhancers Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 29 |
esv3503326 |
chr11:5759970-5762485 |
Weak transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 30 |
esv3503324 |
chr11:5759974-5762463 |
Enhancers Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 31 |
esv3503325 |
chr11:5760004-5762403 |
Enhancers Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 32 |
esv3453564 |
chr11:5760009-5762443 |
Weak transcription Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 33 |
esv3453542 |
chr11:5760010-5762439 |
Weak transcription Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 34 |
esv3453520 |
chr11:5760024-5762393 |
Weak transcription Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 35 |
esv3503328 |
chr11:5760031-5762417 |
Weak transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 36 |
nsv825741 |
chr11:5760039-5762541 |
Enhancers Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 37 |
esv2905 |
chr11:5760054-5762474 |
ZNF genes & repeats Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 38 |
esv1832223 |
chr11:5760056-5773545 |
Bivalent Enhancer ZNF genes & repeats Weak transcription Enhancers
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 39 |
esv1805431 |
chr11:5760056-5809358 |
Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 40 |
esv11059 |
chr11:5760083-5762372 |
ZNF genes & repeats Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 41 |
nsv821206 |
chr11:5760083-5762541 |
Enhancers Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 42 |
nsv8783 |
chr11:5760084-5768911 |
ZNF genes & repeats Weak transcription Bivalent Enhancer Enhancers
|
Chromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 43 |
esv3453586 |
chr11:5760088-5762366 |
Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 44 |
esv3503329 |
chr11:5760088-5762366 |
Enhancers Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 45 |
nsv825743 |
chr11:5760092-5762541 |
Weak transcription Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 46 |
nsv553280 |
chr11:5760106-5761325 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 47 |
nsv553281 |
chr11:5760106-5761326 |
Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 48 |
nsv553282 |
chr11:5760106-5761498 |
Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 49 |
nsv553283 |
chr11:5760106-5761561 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 50 |
nsv553284 |
chr11:5760106-5761761 |
Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
