Variant report

Variant	rs148225724
Chromosome Location	chr6:161815412-161815413
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:161813445..161815530-chr6:162115453..162117705,2	MCF-7	breast:
2	chr6:161815002..161815512-chr6:161919264..161919910,2	K562	blood:

Extended variants
information (count: 20 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886817	chr6:161371621-161846654	Strong transcription Enhancers Weak transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	esv3381361	chr6:161373617-161864101	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	esv2752091	chr6:161592100-161855785	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
4	nsv481931	chr6:161647026-161961906	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
5	nsv1031234	chr6:161676768-162250726	Enhancers ZNF genes & repeats Weak transcription Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
6	nsv869611	chr6:161690974-161817564	Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
7	nsv1025168	chr6:161702621-161831885	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Strong transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
8	nsv886819	chr6:161712035-162520133	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
9	nsv886820	chr6:161712880-162184932	Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
10	nsv830854	chr6:161739926-161927515	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
11	nsv5577	chr6:161775026-161819733	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
12	nsv518931	chr6:161793319-162406335	Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
13	nsv481861	chr6:161802883-162160197	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
14	nsv1033192	chr6:161812419-161860010	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
15	nsv886821	chr6:161812626-161859628	Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
16	nsv1024921	chr6:161814295-161860636	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
17	esv2761040	chr6:161814307-161860636	Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
18	nsv520078	chr6:161814907-161860010	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
19	nsv605066	chr6:161814907-161860010	Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
20	nsv481930	chr6:161815297-161860058	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:58 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:161780600-161835800	Weak transcription	Right Atrium	heart
2	chr6:161814400-161815600	Enhancers	Psoas Muscle	Psoas
3	chr6:161814400-161817800	Enhancers	Skeletal Muscle Female	skeletal muscle
4	chr6:161814600-161815600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr6:161814800-161817800	Enhancers	Brain Germinal Matrix	brain
6	chr6:161815000-161815600	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr6:161815000-161815800	Enhancers	HSMM	muscle
8	chr6:161815200-161815600	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chr6:161815200-161815600	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr6:161815200-161815600	Enhancers	Primary T helper cells PMA-I stimulated	--
11	chr6:161815200-161815600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
12	chr6:161815200-161815600	Enhancers	Primary T killer memory cells from peripheral blood	blood
13	chr6:161815200-161815600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
14	chr6:161815200-161815600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr6:161815200-161815600	Enhancers	Brain Substantia Nigra	brain
16	chr6:161815200-161815600	Enhancers	Dnd41	blood
17	chr6:161815200-161815600	Enhancers	GM12878-XiMat	blood
18	chr6:161815200-161815600	Enhancers	NH-A	brain
19	chr6:161815200-161815600	Flanking Active TSS	NHEK	skin
20	chr6:161815200-161815600	Enhancers	NHLF	lung
21	chr6:161815200-161815800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr6:161815200-161815800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr6:161815200-161815800	Enhancers	Primary T cells fromperipheralblood	blood
24	chr6:161815200-161815800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
25	chr6:161815200-161815800	Enhancers	Primary T helper naive cells from peripheral blood	blood
26	chr6:161815200-161815800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
27	chr6:161815200-161815800	Enhancers	Primary T helper cells fromperipheralblood	blood
28	chr6:161815200-161815800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr6:161815200-161815800	Enhancers	Adipose Nuclei	Adipose
30	chr6:161815200-161815800	Enhancers	Brain Angular Gyrus	brain
31	chr6:161815200-161815800	Enhancers	Brain Hippocampus Middle	brain
32	chr6:161815200-161815800	Enhancers	Brain Inferior Temporal Lobe	brain
33	chr6:161815200-161815800	Enhancers	Fetal Heart	heart
34	chr6:161815200-161815800	Enhancers	A549	lung
35	chr6:161815200-161815800	Enhancers	HMEC	breast
36	chr6:161815200-161815800	Enhancers	Monocytes-CD14+_RO01746	blood
37	chr6:161815200-161816000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
38	chr6:161815200-161816000	Enhancers	Brain Anterior Caudate	brain
39	chr6:161815200-161816000	Enhancers	Fetal Brain Male	brain
40	chr6:161815200-161816600	Enhancers	Skeletal Muscle Male	skeletal muscle
41	chr6:161815200-161817000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr6:161815200-161817000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
43	chr6:161815200-161817800	Enhancers	Cortex derived primary cultured neurospheres	brain
44	chr6:161815400-161815600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr6:161815400-161815600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr6:161815400-161815600	Enhancers	Fetal Muscle Leg	muscle
47	chr6:161815400-161815600	Enhancers	HSMMtube	muscle
48	chr6:161815400-161815600	Enhancers	K562	blood
49	chr6:161815400-161815800	Enhancers	NHDF-Ad	bronchial
50	chr6:161815400-161816000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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