The 2.0 version of rSNPBase

Variant report

Variant rs148507674
Chromosome Location chr13:48966349-48966350
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48909000-48972200 Weak transcription NHEK skin
2 chr13:48912200-48968200 Weak transcription Brain Cingulate Gyrus brain
3 chr13:48914800-48972000 Weak transcription NHLF lung
4 chr13:48916800-48985400 Weak transcription Colonic Mucosa Colon
5 chr13:48918600-48967200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr13:48920200-48974400 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr13:48921600-48972000 Weak transcription Stomach Mucosa stomach
8 chr13:48925200-48974800 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr13:48925400-48976400 Weak transcription Ovary ovary
10 chr13:48925600-48968000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr13:48926800-48972000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr13:48928200-48971800 Weak transcription A549 lung
13 chr13:48929800-48968400 Weak transcription Esophagus oesophagus
14 chr13:48933400-48974000 Weak transcription Rectal Smooth Muscle rectum
15 chr13:48934600-48984200 Weak transcription Right Ventricle heart
16 chr13:48935400-48968200 Weak transcription Spleen Spleen
17 chr13:48936000-48974600 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr13:48936200-48968200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr13:48936400-48973200 Weak transcription Hela-S3 cervix
20 chr13:48941800-48973200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr13:48942400-48967200 Weak transcription Brain Germinal Matrix brain
22 chr13:48943000-48970800 Weak transcription Pancreas Pancrea
23 chr13:48943600-48984200 Weak transcription Brain Angular Gyrus brain
24 chr13:48944000-48974400 Weak transcription Brain Anterior Caudate brain
25 chr13:48944200-48973800 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr13:48944600-48983400 Weak transcription Psoas Muscle Psoas
27 chr13:48945000-48972000 Weak transcription HSMMtube muscle
28 chr13:48945200-48967000 Weak transcription HepG2 liver
29 chr13:48945400-48974400 Weak transcription Small Intestine intestine
30 chr13:48949200-48967800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr13:48949400-48972800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr13:48949600-48968200 Weak transcription Duodenum Mucosa Duodenum
33 chr13:48949600-48968200 Weak transcription Fetal Kidney kidney
34 chr13:48950000-48967800 Weak transcription Stomach Smooth Muscle stomach
35 chr13:48950000-48967800 Weak transcription Thymus Thymus
36 chr13:48950000-48968200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr13:48950600-48968400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr13:48952600-48967400 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr13:48953800-48972000 Weak transcription Osteobl bone
40 chr13:48954400-48972200 Weak transcription HUVEC blood vessel
41 chr13:48954800-48967200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr13:48954800-48967200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr13:48954800-48975000 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr13:48955000-48966800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
45 chr13:48955200-48967400 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr13:48955800-48972000 Weak transcription HMEC breast
47 chr13:48955800-48972000 Weak transcription NHDF-Ad bronchial
48 chr13:48956000-48967000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr13:48956000-48967200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr13:48956000-48974000 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015