Variant report

Variant	rs148525728
Chromosome Location	chr6:109633168-109633169
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv5435	chr6:109633035-109669127	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Active TSS Genic enhancers	TF binding region Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:109619400-109638000	Weak transcription	HepG2	liver
2	chr6:109621600-109634000	Weak transcription	Fetal Muscle Trunk	muscle
3	chr6:109625800-109634200	Weak transcription	Fetal Muscle Leg	muscle
4	chr6:109626200-109634200	Weak transcription	Psoas Muscle	Psoas
5	chr6:109626200-109638800	Weak transcription	Thymus	Thymus
6	chr6:109627600-109639000	Weak transcription	Left Ventricle	heart
7	chr6:109629600-109634000	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr6:109629600-109639800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr6:109629600-109654000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr6:109630200-109634400	Weak transcription	Skeletal Muscle Female	skeletal muscle
11	chr6:109630800-109636200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr6:109630800-109636200	Weak transcription	Fetal Intestine Large	intestine
13	chr6:109631000-109636200	Weak transcription	Fetal Intestine Small	intestine
14	chr6:109631200-109633600	Weak transcription	Stomach Mucosa	stomach
15	chr6:109631600-109634200	Weak transcription	K562	blood
16	chr6:109631600-109636200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr6:109632000-109633800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr6:109632400-109633400	Enhancers	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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