Variant report

Variant	rs1488816
Chromosome Location	chr12:10203926-10203927
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10505748	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1488817	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17734799	0.93[CEU][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17807434	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59462804	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:10201800-10204200	Weak transcription	Primary neutrophils fromperipheralblood	blood
2	chr12:10201800-10204200	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr12:10203800-10204000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr12:10203800-10204000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr12:10203800-10204600	Enhancers	Primary hematopoietic stem cells	blood
6	chr12:10203800-10206200	Enhancers	Primary monocytes fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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