Variant report

Variant rs149045306
Chromosome Location chr5:180233749-180233750
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180230200-180234200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:180230600-180233800 Enhancers NHDF-Ad bronchial
3 chr5:180230600-180237000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
4 chr5:180230800-180234200 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr5:180230800-180234800 Weak transcription A549 lung
6 chr5:180230800-180236200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
7 chr5:180231000-180234600 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr5:180231000-180235200 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr5:180231000-180235200 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr5:180231200-180234400 Weak transcription Osteobl bone
11 chr5:180231200-180235200 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr5:180231200-180236000 Genic enhancers Placenta Placenta
13 chr5:180231200-180236200 Genic enhancers Fetal Muscle Leg muscle
14 chr5:180231400-180234400 Genic enhancers Fetal Muscle Trunk muscle
15 chr5:180231400-180235000 Weak transcription HSMMtube muscle
16 chr5:180231600-180234200 Genic enhancers K562 blood
17 chr5:180231600-180235200 Weak transcription H1 Cell Line embryonic stem cell
18 chr5:180231600-180235400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr5:180231600-180235600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr5:180231800-180234000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr5:180231800-180235800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr5:180232000-180235600 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr5:180232200-180234800 Enhancers Primary Natural Killer cells fromperipheralblood blood
24 chr5:180232200-180235200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr5:180232400-180233800 Weak transcription NHEK skin
26 chr5:180232400-180235200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr5:180232600-180234600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
28 chr5:180232800-180236800 Flanking Active TSS Primary B cells from cord blood blood
29 chr5:180232800-180236800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
30 chr5:180233000-180236000 Enhancers Stomach Mucosa stomach
31 chr5:180233200-180233800 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr5:180233200-180233800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
33 chr5:180233200-180233800 Enhancers Esophagus oesophagus
34 chr5:180233200-180233800 Genic enhancers Gastric stomach
35 chr5:180233200-180234200 Genic enhancers Ganglion Eminence derived primary cultured neurospheres brain
36 chr5:180233200-180234200 Genic enhancers NHLF lung
37 chr5:180233200-180234400 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr5:180233200-180234400 Genic enhancers Right Ventricle heart
39 chr5:180233200-180234600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr5:180233200-180234600 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr5:180233200-180234800 Enhancers HUVEC blood vessel
42 chr5:180233200-180235000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
43 chr5:180233200-180235200 Transcr. at gene 5' and 3' Dnd41 blood
44 chr5:180233200-180236000 Genic enhancers Left Ventricle heart
45 chr5:180233200-180236400 Enhancers Fetal Heart heart
46 chr5:180233200-180236400 Enhancers Pancreas Pancrea
47 chr5:180233200-180236600 Flanking Active TSS Primary T cells from cord blood blood
48 chr5:180233200-180237000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr5:180233400-180233800 Genic enhancers H9 Cell Line embryonic stem cell
50 chr5:180233400-180233800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links