Variant report

Variant	rs1491745
Chromosome Location	chr3:68379169-68379170
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1352853	1.00[CHB][hapmap];0.90[CHD][hapmap];0.91[JPT][hapmap]
rs1388500	0.83[GIH][hapmap];0.81[TSI][hapmap]
rs1388506	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[TSI][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1510354	0.83[GIH][hapmap];0.81[TSI][hapmap]
rs2313283	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs262210	0.83[GIH][hapmap]
rs262211	0.83[GIH][hapmap]
rs262215	0.83[GIH][hapmap]
rs262218	0.83[GIH][hapmap];0.81[TSI][hapmap]
rs262248	0.81[GIH][hapmap]
rs6549118	0.88[CEU][hapmap]
rs7613895	0.81[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752014	chr3:68091879-68416989	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
2	nsv1010992	chr3:68353191-68388825	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv834721	chr3:68365963-68526394	Weak transcription Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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