Variant report

Variant rs1497400
Chromosome Location chr4:143325035-143325036
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:143300200-143326200 Weak transcription Aorta Aorta
2 chr4:143301200-143326200 Weak transcription Gastric stomach
3 chr4:143301600-143325400 Weak transcription Left Ventricle heart
4 chr4:143313000-143326200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr4:143320600-143326600 Active TSS Primary T cells fromperipheralblood blood
6 chr4:143320800-143328000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
7 chr4:143321000-143326800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
8 chr4:143321400-143326600 Active TSS Primary T helper memory cells from peripheral blood 2 blood
9 chr4:143321400-143326600 Active TSS Primary T killer memory cells from peripheral blood blood
10 chr4:143322000-143326400 Active TSS Fetal Muscle Leg muscle
11 chr4:143322200-143326600 Active TSS Primary T helper naive cells from peripheral blood blood
12 chr4:143322200-143326600 Active TSS Primary T helper naive cells fromperipheralblood blood
13 chr4:143322400-143326400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr4:143322600-143325400 Enhancers Cortex derived primary cultured neurospheres brain
15 chr4:143322600-143326600 Active TSS Primary T helper cells PMA-I stimulated --
16 chr4:143322800-143325400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr4:143323000-143325400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr4:143323200-143325400 Enhancers ES-I3 Cell Line embryonic stem cell
19 chr4:143323200-143325600 Enhancers Fetal Heart heart
20 chr4:143323200-143326600 Active TSS Rectal Mucosa Donor 29 rectum
21 chr4:143323400-143325200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr4:143323400-143325200 Weak transcription Spleen Spleen
23 chr4:143323400-143327200 Weak transcription Small Intestine intestine
24 chr4:143323600-143325200 Weak transcription Duodenum Mucosa Duodenum
25 chr4:143323600-143326200 Weak transcription Ovary ovary
26 chr4:143323600-143326400 Weak transcription H9 Cell Line embryonic stem cell
27 chr4:143323600-143326600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
28 chr4:143323600-143326600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
29 chr4:143323600-143326800 Weak transcription ES-WA7 Cell Line embryonic stem cell
30 chr4:143323600-143326800 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
31 chr4:143323800-143326600 Active TSS Primary T killer naive cells fromperipheralblood blood
32 chr4:143323800-143326800 Active TSS NHLF lung
33 chr4:143323800-143327000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr4:143324000-143325200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr4:143324000-143325200 Enhancers HUVEC blood vessel
36 chr4:143324000-143326200 Weak transcription Brain Germinal Matrix brain
37 chr4:143324000-143326600 Active TSS Primary T helper memory cells from peripheral blood 1 blood
38 chr4:143324000-143326800 Active TSS Psoas Muscle Psoas
39 chr4:143324200-143325400 Weak transcription Fetal Muscle Trunk muscle
40 chr4:143324200-143326000 Flanking Active TSS Primary hematopoietic stem cells blood
41 chr4:143324200-143326200 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr4:143324200-143326400 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr4:143324200-143326400 Active TSS Primary Natural Killer cells fromperipheralblood blood
44 chr4:143324200-143326600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr4:143324400-143325200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr4:143324400-143325200 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr4:143324400-143325400 Weak transcription Brain Hippocampus Middle brain
48 chr4:143324400-143325400 Weak transcription Fetal Lung lung
49 chr4:143324400-143325400 Weak transcription Right Atrium heart
50 chr4:143324400-143325600 Weak transcription Brain Angular Gyrus brain

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