Variant report

Variant rs1499659
Chromosome Location chr1:56041825-56041826
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56035400-56043200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr1:56037200-56047200 Weak transcription Esophagus oesophagus
3 chr1:56038000-56042000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
4 chr1:56038200-56042200 Enhancers Cortex derived primary cultured neurospheres brain
5 chr1:56038400-56042200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
6 chr1:56039000-56045200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:56039000-56045800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr1:56039000-56046000 Weak transcription NHLF lung
9 chr1:56039000-56046800 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr1:56039200-56045800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:56039200-56047200 Weak transcription Psoas Muscle Psoas
12 chr1:56039400-56045000 Weak transcription HSMMtube muscle
13 chr1:56039600-56043400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:56039600-56046200 Weak transcription NH-A brain
15 chr1:56040400-56042000 Enhancers Fetal Muscle Trunk muscle
16 chr1:56040600-56042200 Enhancers Fetal Muscle Leg muscle
17 chr1:56040600-56058600 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr1:56041000-56042000 Enhancers Colon Smooth Muscle Colon
19 chr1:56041000-56042000 Enhancers Fetal Lung lung
20 chr1:56041000-56042200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:56041000-56042200 Enhancers Brain Angular Gyrus brain
22 chr1:56041000-56042200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
23 chr1:56041200-56042000 Enhancers Brain Anterior Caudate brain
24 chr1:56041200-56042000 Enhancers Brain Germinal Matrix brain
25 chr1:56041200-56042000 Enhancers Brain Inferior Temporal Lobe brain
26 chr1:56041200-56042000 Enhancers HSMM muscle
27 chr1:56041200-56042200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:56041200-56042200 Enhancers Brain Hippocampus Middle brain
29 chr1:56041200-56042200 Enhancers Brain Substantia Nigra brain
30 chr1:56041200-56042200 Enhancers Left Ventricle heart
31 chr1:56041200-56042200 Enhancers Right Atrium heart
32 chr1:56041400-56042000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:56041400-56042000 Enhancers Placenta Amnion Placenta Amnion
34 chr1:56041400-56042200 Enhancers Brain Cingulate Gyrus brain
35 chr1:56041600-56044400 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:56041800-56042000 Enhancers Right Ventricle heart
37 chr1:56041800-56042200 Enhancers Lung lung
38 chr1:56041800-56042200 Enhancers Pancreas Pancrea
39 chr1:56041800-56045000 Weak transcription Osteobl bone
40 chr1:56041800-56045200 Weak transcription NHDF-Ad bronchial

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