Variant report

Variant	rs1507084
Chromosome Location	chr8:59092964-59092965
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs2939974	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2977384	0.81[EUR][1000 genomes]
rs2977385	0.85[AMR][1000 genomes]
rs2977386	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2977387	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2977389	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2977390	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2977391	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4373508	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4398899	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7815202	0.81[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59084200-59099800	Weak transcription	Fetal Brain Female	brain
2	chr8:59091800-59093200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:59091800-59093200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr8:59091800-59093200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr8:59091800-59093400	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr8:59091800-59093400	Enhancers	HMEC	breast
7	chr8:59092000-59093000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr8:59092000-59093000	Enhancers	NHEK	skin
9	chr8:59092000-59093200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr8:59092000-59093200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr8:59092200-59093000	Enhancers	HSMM	muscle
12	chr8:59092400-59093000	Enhancers	Left Ventricle	heart
13	chr8:59092400-59093000	Enhancers	HSMMtube	muscle
14	chr8:59092800-59093000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr8:59092800-59093000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr8:59092800-59093400	Enhancers	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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