Variant report

Variant	rs2977389
Chromosome Location	chr8:59094929-59094930
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1507084	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2939974	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2977384	0.81[EUR][1000 genomes]
rs2977385	0.85[AMR][1000 genomes]
rs2977386	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2977387	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2977390	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2977391	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4373508	0.82[EUR][1000 genomes]
rs4398899	0.82[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59084200-59099800	Weak transcription	Fetal Brain Female	brain
2	chr8:59093200-59103200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr8:59093400-59095200	Weak transcription	Pancreas	Pancrea
4	chr8:59093400-59097600	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr8:59093400-59105600	Weak transcription	HMEC	breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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