Variant report
| Variant | rs150787 |
|---|---|
| Chromosome Location | chr14:79369440-79369441 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:8)
| rs_ID | r2[population] |
|---|---|
| rs150784 | 1.00[MEX][hapmap] |
| rs150785 | 1.00[MEX][hapmap] |
| rs154430 | 1.00[MEX][hapmap] |
| rs2202178 | 1.00[MEX][hapmap] |
| rs2964908 | 1.00[MEX][hapmap] |
| rs5023075 | 1.00[MEX][hapmap] |
| rs6574489 | 1.00[MEX][hapmap] |
| rs7143117 | 1.00[MEX][hapmap] |
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv832838 | chr14:79306627-79445382 | Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
| 2 | nsv1048274 | chr14:79323592-79417906 | Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
