Variant report

Variant	rs1509787
Chromosome Location	chrX:154068634-154068635
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
ENSG00000130826	Chromatin interaction
ENSG00000206693	Chromatin interaction
ENSG00000130830	Chromatin interaction
ENSG00000160219	Chromatin interaction

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12398789	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1467061	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1800291	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1936642	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap]
rs5945116	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5945122	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5945249	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5945258	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7053448	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7058826	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7061362	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7063915	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:154065000-154077600	Weak transcription	Brain Anterior Caudate	brain
2	chrX:154066000-154085400	Weak transcription	Spleen	Spleen
3	chrX:154068000-154078400	Weak transcription	Left Ventricle	heart
4	chrX:154068000-154095600	Weak transcription	Ovary	ovary
5	chrX:154068600-154069200	Enhancers	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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