Variant report

Variant	rs151266821
Chromosome Location	chr3:119804520-119804521
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:119797695..119800113-chr3:119802432..119804591,2	K562	blood:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949589	chr3:119560606-120175917	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
2	nsv1001476	chr3:119575386-120075417	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
3	nsv536704	chr3:119575386-120075417	Enhancers Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
4	nsv3964	chr3:119786623-119831698	Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	59 gene(s)	inside rSNPs	diseases
5	nsv829697	chr3:119802856-119918435	Flanking Active TSS Weak transcription Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	59 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:95 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:119760200-119805400	Weak transcription	HMEC	breast
2	chr3:119764600-119812000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr3:119771400-119809400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr3:119771800-119805400	Weak transcription	NHEK	skin
5	chr3:119773200-119807600	Weak transcription	Right Ventricle	heart
6	chr3:119779400-119807400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr3:119779600-119807800	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr3:119780600-119807800	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr3:119788400-119805400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr3:119788400-119808600	Weak transcription	Primary B cells from cord blood	blood
11	chr3:119789400-119809200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr3:119789800-119807800	Weak transcription	Primary B cells from peripheral blood	blood
13	chr3:119790000-119807600	Weak transcription	Liver	Liver
14	chr3:119790200-119805000	Weak transcription	HepG2	liver
15	chr3:119790400-119805200	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr3:119790600-119807400	Weak transcription	Brain Substantia Nigra	brain
17	chr3:119790600-119807800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
18	chr3:119790600-119809200	Weak transcription	HUES6 Cell Line	embryonic stem cell
19	chr3:119790800-119808000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr3:119790800-119809200	Weak transcription	HUES48 Cell Line	embryonic stem cell
21	chr3:119790800-119809400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
22	chr3:119791000-119809600	Weak transcription	Fetal Muscle Leg	muscle
23	chr3:119793000-119807400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
24	chr3:119793200-119805400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr3:119795200-119805200	Weak transcription	Hela-S3	cervix
26	chr3:119796400-119804800	Weak transcription	Stomach Mucosa	stomach
27	chr3:119796600-119804600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr3:119796800-119806000	Enhancers	Primary T helper cells PMA-I stimulated	--
29	chr3:119797000-119807400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr3:119797000-119807800	Weak transcription	Pancreatic Islets	Pancreatic Islet
31	chr3:119797200-119807600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr3:119797600-119808000	Weak transcription	NHLF	lung
33	chr3:119797800-119805200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
34	chr3:119798000-119805400	Weak transcription	Duodenum Mucosa	Duodenum
35	chr3:119798000-119807600	Weak transcription	NHDF-Ad	bronchial
36	chr3:119798400-119807600	Weak transcription	Right Atrium	heart
37	chr3:119798400-119809400	Weak transcription	Lung	lung
38	chr3:119798600-119807400	Weak transcription	Thymus	Thymus
39	chr3:119798600-119807600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
40	chr3:119798600-119807600	Weak transcription	Fetal Thymus	thymus
41	chr3:119798800-119807600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
42	chr3:119798800-119807800	Weak transcription	K562	blood
43	chr3:119799000-119807600	Weak transcription	Duodenum Smooth Muscle	Duodenum
44	chr3:119799000-119808000	Weak transcription	Primary hematopoietic stem cells	blood
45	chr3:119799000-119810400	Weak transcription	Placenta	Placenta
46	chr3:119799200-119806800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
47	chr3:119799200-119810600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
48	chr3:119799600-119805400	Weak transcription	Fetal Intestine Small	intestine
49	chr3:119799600-119807600	Weak transcription	Primary T cells fromperipheralblood	blood
50	chr3:119799800-119805800	Weak transcription	Monocytes-CD14+_RO01746	blood

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