Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44446026..44447976-chr10:44454993..44457895,2	K562	blood:
2	chr10:44453236..44456147-chr10:44456397..44460102,3	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs12570158	0.95[ASN][1000 genomes]
rs12572433	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12572701	0.95[ASN][1000 genomes]
rs1408941	1.00[AFR][1000 genomes];0.98[ASN][1000 genomes]
rs17154663	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17154683	1.00[CEU][hapmap];0.93[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4948794	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4948795	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55738485	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs58037492	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58297052	0.96[ASN][1000 genomes]
rs58635230	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs912801	0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051921	chr10:44378011-44458880	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44437600-44460800	Weak transcription	Gastric	stomach
2	chr10:44453000-44460200	Enhancers	Ovary	ovary
3	chr10:44454600-44457200	Weak transcription	Spleen	Spleen
4	chr10:44455000-44457200	Weak transcription	Left Ventricle	heart
5	chr10:44455000-44460800	Weak transcription	Aorta	Aorta
6	chr10:44455600-44462000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr10:44455800-44460800	Weak transcription	Fetal Heart	heart
8	chr10:44456000-44457000	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr10:44456200-44457200	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr10:44456200-44457400	Weak transcription	Lung	lung
11	chr10:44456200-44458400	Enhancers	Fetal Muscle Leg	muscle
12	chr10:44456200-44459400	Weak transcription	Right Ventricle	heart
13	chr10:44456400-44456800	Weak transcription	Fetal Muscle Trunk	muscle
14	chr10:44456400-44457800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr10:44456400-44459800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr10:44456600-44457400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr10:44456600-44457600	Enhancers	Right Atrium	heart
18	chr10:44456600-44457600	Enhancers	Osteobl	bone
19	chr10:44456600-44459800	Enhancers	Pancreas	Pancrea
20	chr10:44456600-44461600	Enhancers	Fetal Kidney	kidney

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