Variant report

Variant rs1533292
Chromosome Location chr4:90044048-90044049
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:90033400-90048200 Weak transcription Ovary ovary
2 chr4:90033400-90049200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr4:90033600-90045600 Weak transcription Esophagus oesophagus
4 chr4:90033600-90045600 Weak transcription Pancreas Pancrea
5 chr4:90033600-90049200 Weak transcription Gastric stomach
6 chr4:90033600-90052200 Weak transcription Aorta Aorta
7 chr4:90034800-90049200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr4:90035400-90044600 Weak transcription Fetal Muscle Leg muscle
9 chr4:90036600-90044800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr4:90037000-90046200 Weak transcription Primary T cells from cord blood blood
11 chr4:90039200-90044600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr4:90041600-90045200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr4:90042200-90047600 Enhancers Fetal Intestine Large intestine
14 chr4:90042400-90044800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr4:90042600-90044200 Enhancers K562 blood
16 chr4:90042600-90049600 Enhancers Fetal Intestine Small intestine
17 chr4:90043000-90045200 Enhancers Stomach Mucosa stomach
18 chr4:90043200-90044400 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr4:90043200-90045000 Enhancers NHEK skin
20 chr4:90043200-90045800 Enhancers HMEC breast
21 chr4:90043400-90050200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr4:90043600-90044800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
23 chr4:90043600-90044800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr4:90043600-90045200 Flanking Active TSS HepG2 liver
25 chr4:90043600-90046000 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr4:90043600-90046000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr4:90043800-90045200 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr4:90043800-90045200 Flanking Active TSS A549 lung
29 chr4:90043800-90045800 Enhancers Liver Liver
30 chr4:90043800-90046000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr4:90044000-90044200 Enhancers Brain Anterior Caudate brain
32 chr4:90044000-90044200 Enhancers Small Intestine intestine
33 chr4:90044000-90044400 Weak transcription Placenta Placenta
34 chr4:90044000-90044600 Enhancers Rectal Mucosa Donor 31 rectum
35 chr4:90044000-90044800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
36 chr4:90044000-90044800 Enhancers HUES64 Cell Line embryonic stem cell
37 chr4:90044000-90045000 Enhancers Brain Substantia Nigra brain
38 chr4:90044000-90045000 Enhancers NH-A brain
39 chr4:90044000-90045400 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr4:90044000-90045800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
41 chr4:90044000-90046000 Enhancers Duodenum Mucosa Duodenum

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