Variant report

Variant	rs1537226
Chromosome Location	chr1:56615004-56615005
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1119073	0.87[CHB][hapmap];0.82[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1412222	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1474439	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17113456	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs17113474	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs17113557	0.83[AMR][1000 genomes]
rs2140994	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs57089954	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58429206	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56605800-56622600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr1:56611200-56617600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr1:56612600-56615600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr1:56612600-56616000	Weak transcription	Psoas Muscle	Psoas
5	chr1:56612800-56616400	Weak transcription	Fetal Muscle Leg	muscle
6	chr1:56612800-56616800	Weak transcription	Fetal Lung	lung
7	chr1:56612800-56618600	Weak transcription	Fetal Thymus	thymus
8	chr1:56613000-56616000	Weak transcription	Adipose Nuclei	Adipose
9	chr1:56613400-56615200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr1:56613600-56615200	Enhancers	HUVEC	blood vessel
11	chr1:56613600-56615400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr1:56613800-56616400	Weak transcription	Fetal Stomach	stomach
13	chr1:56614000-56616600	Weak transcription	Fetal Intestine Large	intestine
14	chr1:56615000-56617400	Enhancers	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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